›› 2011, Vol. 23 ›› Issue (5): 0-875.

• 作物科学 •    

大豆低植酸突变体Gm-lpa-ZC-2的精细定位

李佰权,姜莹,付旭军,朱申龙,朱丹华,袁凤杰*   

  1. 浙江省农业科学院 作物与核技术研究所,浙江 杭州 310021
  • 收稿日期:1900-01-01 修回日期:1900-01-01 出版日期:2011-09-25 发布日期:2011-09-25

Fine mapping of the Gm-lpa-ZC-2 gene in a low phytic acid soybean mutant

LI Bai-quan;JIANG Ying;FU Xu-jun;ZHU Shen-long;ZHU Dan-hua;YUAN Feng-jie*   

  1. Institute of Crop Science and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China
  • Received:1900-01-01 Revised:1900-01-01 Online:2011-09-25 Published:2011-09-25

摘要: 降低大豆植酸含量对于改善大豆营养品质极其重要。通过诱变的方法筛选到大豆低植酸突变体Gm-lpa-ZC-2,经典遗传学分析表明:其突变性状由隐性单基因所控制,并被定位在大豆连锁群B2上。试验在大豆低植酸突变体Gm-lpa-ZC-2初步定位的基础上,通过构建较大的遗传群体,运用生物信息学发展新的连锁标记,结合大豆基因组学和传统定位的方法,进行突变基因的精确定位。结果表明:位于大豆B2连锁群上的Gm-lpa-ZC-2突变基因,与连锁标记Satt168和Satt416的遗传距离远大于初步定位的结果,为18.2 cM;在此基础上,利用大豆基因组序列信息,在Satt168标记的上游序列与目的基因之间的染色体片段,4 900~8 200 kb的区域中,发掘到9对在遗传群体亲本间具有多态性的SSR引物;其中SSR位点psm lpa-224,psm lpa-225和psm lpa-226与目的基因的距离仅为0.8 cM,实现了突变基因的精细定位。

关键词: 大豆[Glycine max L. Merr.], 低植酸, 突变体, 精细定位

Abstract: Reducing the content of phytic acid (PA, myo\|inositol 1, 2, 3, 4, 5, 6 hexakisphosphate) is important for improvement of the nutritional quality of soybean. By radiation, one novel soybean [(Glycine max L. (Merr.)] mutant with low PA content, Gm-lpa-ZC-2, was isolated and characterized. Classic genetic study has shown that the lpa mutation was determined by a single recessive gene and was mapped on linkage group B2. Following preliminary mapping of Gm-lpa-ZC-2, in this study, we constructed large genetic populations, developed some new position-specific microsatellite markers by using soybean whole genome sequence and bioinformatics tools, and fine mapped the mutant gene based on soybean genomics and methods of traditional mapping. The results showed that the genetic distance between mutant gene Gm-lpa-ZC-2 and SSR marker Satt168 and Satt416 was much larger than the prediction in our previous study, which should be 18.2 cM. Based on these results, 9 pairs of position-specific microsatellite marker which had polymorphism between the two parental lines Zhexiandou 4 and Gm-lpa-ZC-2 were developed in a 4 900-8 200 kb region between target gene and satt168 in LG B2 . The lpa mutation gene was fine mapped on LG B2, closely linked with microsatellite loci psm lpa-224, psm lpa-225 and psm lpa-226, at genetic distances of 0.8cM.

Key words: soybean [Glycine max L. Merr.], low phytate, mutant, fine mapping