浙江农业学报

• 作物科学 •    下一篇

水稻分蘖期根系对根际细菌丰度和群落结构的影响

  

  1. (1 中国科学院 亚热带农业生态研究所,湖南 长沙 410125;2 中国科学院大学 研究生院,北京 100049)
  • 出版日期:2015-12-25 发布日期:2016-01-05

Effects of growing rice roots on the bacterial abundance and community structure in the rhizosphere during tillering stage

  1. (1 Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China; 2 Graduate University of Chinese Academy of Sciences, Beijing 100049, China)
  • Online:2015-12-25 Published:2016-01-05

摘要: 通过水稻盆栽试验,以细菌16S rRNA基因为检测对象,采用实时荧光定量PCR (qPCR) 和末端限制性片段长度多态性 (T\|RFLP) 分子生物技术,探究了水稻根际与非根际土壤中细菌丰度和群落结构的差异。结果表明,水稻根系生长显著增加了根际土壤中的细菌丰度,但根际土壤中的细菌群落多样性指数 (H′) 和均匀度指数 (E) 降低。根际与非根际土壤中的细菌群落结构明显不同,根际土壤中含有相对丰度较高的优势细菌群落,但淹水和落干时的优势群落不同。水稻根系显著改变了根际土壤理化性质,淹水时NH+4\|N和TC与细菌群落结构具有显著相关性,而落干后土壤水分和pH与细菌群落结构具有显著相关性。这表明,水稻根系生长对稻田土壤细菌数量和群落结构均可产生显著的影响,而水稻根系活动对土壤理化性质的改变可能是导致细菌群落差异的主要原因。因此,在水稻生长季,水稻根系活动和稻田土壤水分状况是影响细菌生态功能的重要因素。

关键词: 水稻 (Oryza sativa L.);根系;根际;细菌群落;16S rRNA基因;qPCR;T\, RFLP

Abstract: In the pot experiment, bacterial 16S rRNA gene was targeted as the molecular biomarker. Quantitative PCR (qPCR) and terminal restriction fragment length polymorphism (T-RFLP) were applied to explore the effects of rice roots on the bacterial community during the rice growing season. Results showed that bacterial abundance in the rhizospheric soil was significantly increased by rice roots, but Shannon diversity index (H′) and evenness index (E) of bacterial community were lower in the rhizosphere than bulk soil. Bacterial community structures were clearly different between rhizosphere and non-rhizosphere soil, dominant bacterial communities appeared with a relatively higher abundance in the rhizosphere soil, while the dominant bacterial communities were different between the flooded and drained treatments. Soil properties in the rhizosphere soil were obviously influenced by the rice roots. Bacterial community structures were closely correlated with soil NH+4-N, TC under the flooded treatment, but with soil pH and moisture under the drained. In summary, growing rice roots could exert significant influence on bacterial abundance and community structures during rice growing season, which could be induced by the variation of soil properties due to rice roots activities. Therefore, rice roots and water status might be important factors affecting bacterial ecological function in paddy fields.

Key words: rice (Oryza sativa L.), root, rhizosphere, bacterial community, 16S rRNA gene, qPCR, T-RFLP