浙江农业学报 ›› 2024, Vol. 36 ›› Issue (5): 1124-1133.DOI: 10.3969/j.issn.1004-1524.20230541
陈瑶瑶(), 刘雪萍, 张绍勇, 王继栋, 王瑞俊, 张立钦*(
)
收稿日期:
2023-04-26
出版日期:
2024-05-25
发布日期:
2024-05-29
作者简介:
陈瑶瑶(1997—),女,山西太原人,硕士,研究方向为水产医学。E-mail:969816947@qq.com
通讯作者:
* 张立钦,E-mail:zlqwz@zjhu.edu.cn
基金资助:
CHEN Yaoyao(), LIU Xueping, ZHANG Shaoyong, WANG Jidong, WANG Ruijun, ZHANG Liqin*(
)
Received:
2023-04-26
Online:
2024-05-25
Published:
2024-05-29
摘要:
采用稀释涂布法、改良分离培养基和16S rRNA基因序列对南太湖四季水体的可培养细菌进行分离、纯化与鉴定,筛选可抑制铜绿微囊藻(Microcystis aeruginosa)生长的活性细菌,并追踪其活性成分。结果表明:共分离得到420株可培养细菌,隶属于4门9纲20目35科66属192种,其中,黄杆菌属(Flavobacterium)、假单胞菌属(Pseudomonas)、短波单胞菌属(Brevundimonas)、芽孢杆菌属(Bacillus)的菌株数较多。16S rRNA基因序列结果显示,有20株细菌属于潜在新种。共分离到7株具有明显抑藻活性的细菌,其中,黄杆菌属菌株1-2-14的抑藻效果最佳,第7天时抑制率达71.52%。通过活性追踪,分离得到2个活性单体化合物cyclo(4-hydroxy-L-Pro-L-Leu)和pterodontriol B,其48 h抑藻活性分别为56.87%和67.81%。
中图分类号:
陈瑶瑶, 刘雪萍, 张绍勇, 王继栋, 王瑞俊, 张立钦. 南太湖水体抑藻菌的筛选分离及其活性成分鉴定[J]. 浙江农业学报, 2024, 36(5): 1124-1133.
CHEN Yaoyao, LIU Xueping, ZHANG Shaoyong, WANG Jidong, WANG Ruijun, ZHANG Liqin. Isolation of strains with algicidal activity from South Taihu Lake in China and identification of active compounds[J]. Acta Agriculturae Zhejiangensis, 2024, 36(5): 1124-1133.
门 Phylum | 纲 Class | 目 Order | 科 Family | 属 Genus | 种数量 Species number | 菌株数量 Strain number | |||
---|---|---|---|---|---|---|---|---|---|
变形菌门 Pseudomonadota | β-变形菌纲 Betaproteobacteria | 伯克氏菌目 Burkholderiales | 产碱菌科 Alcaligenaceae | 产碱菌属Alcaligenes | 1 | 10 | |||
丛毛单胞菌科 Comamonadaceae | 氢噬胞菌属Hydrogenophaga Simplicispira | 3 1 | 5 2 | ||||||
食酸菌属Acidovorax | 3 | 4 | |||||||
Curvibacter | 1 | 2 | |||||||
Aquincola | 1 | 1 | |||||||
Inhella | 1 | 1 | |||||||
大单胞菌属Macromonas | 1 | 1 | |||||||
Kinneretia | 1 | 1 | |||||||
Ramlibacter | 1 | 1 | |||||||
草酸杆菌科 | 紫色杆菌属Janthinobacterium | 5 | 6 | ||||||
Oxalobacteraceae | 马赛菌属Massilia | 1 | 2 | ||||||
Undibacterium | 1 | 2 | |||||||
伯克氏菌科 Burkholderiaceae | Ralstonia | 2 | 9 | ||||||
奈瑟菌目 | 奈瑟氏菌科 | Aquella | 1 | 1 | |||||
Neisseriales | Neisseriaceae | 福格斯氏菌属Vogesella | 1 | 1 | |||||
α-变形菌纲 | 鞘脂单胞菌目 | Sphingosinicellaceae | Sandarakinorhabdus | 1 | 2 | ||||
Alphaproteobacteria | Sphingomonadales | 赤杆菌科 Erythrobacteraceae | 赤杆菌属Erythrobacter | 4 | 16 | ||||
鞘脂单胞菌科 | 新鞘脂属Novosphingobium | 7 | 10 | ||||||
Sphingomonadaceae | 鞘氨醇单胞菌属Sphingomonas | 4 | 7 | ||||||
鞘脂单胞菌属Sphingopyxis | 4 | 6 | |||||||
Sphingorhabdus | 5 | 16 | |||||||
柄杆菌目 | 柄杆菌科 | 短波单胞菌属Brevundimonas | 10 | 21 | |||||
Caulobacterales | Caulobacteraceae | 柄杆菌属Caulobacter | 4 | 11 | |||||
PAC001798_g | 1 | 1 | |||||||
苯基杆菌属Phenylobacterium | 1 | 4 | |||||||
根瘤菌目 | Boseaceae | 包西氏菌属Bosea | 2 | 3 | |||||
Rhizobiales | 甲基杆菌科 Methylobacteriaceae | 甲基杆菌属Methylobacterium | 2 | 2 | |||||
硝化杆菌科 Nitrobacteraceae | 阿菲波菌属Afipia | 1 | 1 | ||||||
叶杆菌科 Phyllobacteriaceae | 中慢生根瘤菌属Mesorhizobium | 1 | 1 | ||||||
根瘤菌科 Rhizobiaceae | 根瘤菌属Rhizobium | 2 | 6 | ||||||
黄色杆菌科 Xanthobacteraceae | 黄色杆菌属Xanthobacter | 1 | 1 | ||||||
红杆菌目 Rhodobacterales | 红杆菌科 Rhodobacteraceae | 芽殖杆菌属 Gemmobacter | 3 | 4 | |||||
红螺菌目 | Azospirillaceae | Elstera | 1 | 1 | |||||
Rhodospirillales | Niveispirillum | 1 | 1 | ||||||
γ-变形菌纲 Gammaproteobacteria | 气单胞菌目 Aeromonadales | 气单胞菌科 Aeromonadaceae | 气单胞菌属Aeromonas | 1 | 1 | ||||
着色菌目 Chromatiales | 着色菌科 Chromatiaceae | Pararheinheimera | 3 | 7 | |||||
溶杆菌目 | Lysobacteraceae | 溶杆菌属Lysobacter | 2 | 5 | |||||
Lysobacterales | Pseudoxanthomonas | 2 | 7 | ||||||
Silanimonas | 1 | 1 | |||||||
寡养单胞菌属Stenotrophomonas | 1 | 2 | |||||||
假单胞菌目 Pseudomonadales | 莫拉菌科 Moraxellaceae | 不动杆菌属Acinetobacter | 1 | 1 | |||||
假单胞菌科 Pseudomonadaceae | 假单胞菌属Pseudomonas | 24 | 56 | ||||||
拟杆菌门 Bacteroidota | 噬几丁质菌纲 Chitinophagia | 噬几丁质菌目 Chitinophagales | 噬几丁质菌科 Chitinophagaceae | Lacibacter | 1 | 1 | |||
黄杆菌纲 Flavobacteriia | 黄杆菌目 Flavobacteriales | 黄杆菌科 Flavobacteriaceae | 黄杆菌属Flavobacterium | 21 | 77 | ||||
威克斯氏菌科 | Cloacibacterium | 1 | 2 | ||||||
Weeksellaceae | 伊丽莎白菌属Elizabethkingia | 1 | 1 | ||||||
鞘脂杆菌纲 Sphingobacteriia | 鞘氨醇杆菌目 Sphingobacteriales | 鞘脂杆菌科 Sphingobacteriaceae | 土地杆菌属Pedobacter | 1 | 2 | ||||
芽孢杆菌门 | 芽孢杆菌纲 | 核衣细菌目 | 芽孢杆菌科 | 芽孢杆菌属Bacillus | 12 | 29 | |||
Bacillota | Bacilli | Caryophanales | Bacillaceae | Falsibacillus | 1 | 1 | |||
Fictibacillus | 3 | 9 | |||||||
Niallia | 2 | 2 | |||||||
Priestia | 2 | 5 | |||||||
Rossellomorea | 3 | 4 | |||||||
微小杆菌属Exiguobacterium | 1 | 2 | |||||||
Caryophanaceae | Lysinibacillus | 1 | 2 | ||||||
Metasolibacillus | 2 | 4 | |||||||
Rummeliibacillus | 1 | 1 | |||||||
类芽孢杆菌科 Paenibacillaceae | 短杆菌属Brevibacillus | 1 | 1 | ||||||
梭菌纲 Clostridia | Eubacteriales | 毛螺菌科 Lachnospiraceae | 毛螺菌属Lachnospira | 1 | 1 | ||||
放线菌门 | 放线菌纲 | 微球菌目 | Dermabacteraceae | Brachybacterium | 1 | 1 | |||
Actinomycetota | Actinomycetes | Micrococcales | 微杆菌科 | Agrococcus | 1 | 1 | |||
Microbacteriaceae | 微杆菌属Microbacterium | 8 | 9 | ||||||
Micromonosporales | 小单孢菌科 Micromonosporaceae | 小单孢菌属Micromonospora | 2 | 5 | |||||
分枝杆菌目 Mycobacteriales | Mycobacteriaceae 链霉菌科 | 分枝杆菌属Mycolicibacterium 链霉菌属Streptomyces | 6 4 | 13 4 | |||||
Kitasatosporales | Streptomycetaceae |
表1 分离出的细菌株数及其种属分布
Table 1 Quantity of the isolated strains and their taxonomic distribution
门 Phylum | 纲 Class | 目 Order | 科 Family | 属 Genus | 种数量 Species number | 菌株数量 Strain number | |||
---|---|---|---|---|---|---|---|---|---|
变形菌门 Pseudomonadota | β-变形菌纲 Betaproteobacteria | 伯克氏菌目 Burkholderiales | 产碱菌科 Alcaligenaceae | 产碱菌属Alcaligenes | 1 | 10 | |||
丛毛单胞菌科 Comamonadaceae | 氢噬胞菌属Hydrogenophaga Simplicispira | 3 1 | 5 2 | ||||||
食酸菌属Acidovorax | 3 | 4 | |||||||
Curvibacter | 1 | 2 | |||||||
Aquincola | 1 | 1 | |||||||
Inhella | 1 | 1 | |||||||
大单胞菌属Macromonas | 1 | 1 | |||||||
Kinneretia | 1 | 1 | |||||||
Ramlibacter | 1 | 1 | |||||||
草酸杆菌科 | 紫色杆菌属Janthinobacterium | 5 | 6 | ||||||
Oxalobacteraceae | 马赛菌属Massilia | 1 | 2 | ||||||
Undibacterium | 1 | 2 | |||||||
伯克氏菌科 Burkholderiaceae | Ralstonia | 2 | 9 | ||||||
奈瑟菌目 | 奈瑟氏菌科 | Aquella | 1 | 1 | |||||
Neisseriales | Neisseriaceae | 福格斯氏菌属Vogesella | 1 | 1 | |||||
α-变形菌纲 | 鞘脂单胞菌目 | Sphingosinicellaceae | Sandarakinorhabdus | 1 | 2 | ||||
Alphaproteobacteria | Sphingomonadales | 赤杆菌科 Erythrobacteraceae | 赤杆菌属Erythrobacter | 4 | 16 | ||||
鞘脂单胞菌科 | 新鞘脂属Novosphingobium | 7 | 10 | ||||||
Sphingomonadaceae | 鞘氨醇单胞菌属Sphingomonas | 4 | 7 | ||||||
鞘脂单胞菌属Sphingopyxis | 4 | 6 | |||||||
Sphingorhabdus | 5 | 16 | |||||||
柄杆菌目 | 柄杆菌科 | 短波单胞菌属Brevundimonas | 10 | 21 | |||||
Caulobacterales | Caulobacteraceae | 柄杆菌属Caulobacter | 4 | 11 | |||||
PAC001798_g | 1 | 1 | |||||||
苯基杆菌属Phenylobacterium | 1 | 4 | |||||||
根瘤菌目 | Boseaceae | 包西氏菌属Bosea | 2 | 3 | |||||
Rhizobiales | 甲基杆菌科 Methylobacteriaceae | 甲基杆菌属Methylobacterium | 2 | 2 | |||||
硝化杆菌科 Nitrobacteraceae | 阿菲波菌属Afipia | 1 | 1 | ||||||
叶杆菌科 Phyllobacteriaceae | 中慢生根瘤菌属Mesorhizobium | 1 | 1 | ||||||
根瘤菌科 Rhizobiaceae | 根瘤菌属Rhizobium | 2 | 6 | ||||||
黄色杆菌科 Xanthobacteraceae | 黄色杆菌属Xanthobacter | 1 | 1 | ||||||
红杆菌目 Rhodobacterales | 红杆菌科 Rhodobacteraceae | 芽殖杆菌属 Gemmobacter | 3 | 4 | |||||
红螺菌目 | Azospirillaceae | Elstera | 1 | 1 | |||||
Rhodospirillales | Niveispirillum | 1 | 1 | ||||||
γ-变形菌纲 Gammaproteobacteria | 气单胞菌目 Aeromonadales | 气单胞菌科 Aeromonadaceae | 气单胞菌属Aeromonas | 1 | 1 | ||||
着色菌目 Chromatiales | 着色菌科 Chromatiaceae | Pararheinheimera | 3 | 7 | |||||
溶杆菌目 | Lysobacteraceae | 溶杆菌属Lysobacter | 2 | 5 | |||||
Lysobacterales | Pseudoxanthomonas | 2 | 7 | ||||||
Silanimonas | 1 | 1 | |||||||
寡养单胞菌属Stenotrophomonas | 1 | 2 | |||||||
假单胞菌目 Pseudomonadales | 莫拉菌科 Moraxellaceae | 不动杆菌属Acinetobacter | 1 | 1 | |||||
假单胞菌科 Pseudomonadaceae | 假单胞菌属Pseudomonas | 24 | 56 | ||||||
拟杆菌门 Bacteroidota | 噬几丁质菌纲 Chitinophagia | 噬几丁质菌目 Chitinophagales | 噬几丁质菌科 Chitinophagaceae | Lacibacter | 1 | 1 | |||
黄杆菌纲 Flavobacteriia | 黄杆菌目 Flavobacteriales | 黄杆菌科 Flavobacteriaceae | 黄杆菌属Flavobacterium | 21 | 77 | ||||
威克斯氏菌科 | Cloacibacterium | 1 | 2 | ||||||
Weeksellaceae | 伊丽莎白菌属Elizabethkingia | 1 | 1 | ||||||
鞘脂杆菌纲 Sphingobacteriia | 鞘氨醇杆菌目 Sphingobacteriales | 鞘脂杆菌科 Sphingobacteriaceae | 土地杆菌属Pedobacter | 1 | 2 | ||||
芽孢杆菌门 | 芽孢杆菌纲 | 核衣细菌目 | 芽孢杆菌科 | 芽孢杆菌属Bacillus | 12 | 29 | |||
Bacillota | Bacilli | Caryophanales | Bacillaceae | Falsibacillus | 1 | 1 | |||
Fictibacillus | 3 | 9 | |||||||
Niallia | 2 | 2 | |||||||
Priestia | 2 | 5 | |||||||
Rossellomorea | 3 | 4 | |||||||
微小杆菌属Exiguobacterium | 1 | 2 | |||||||
Caryophanaceae | Lysinibacillus | 1 | 2 | ||||||
Metasolibacillus | 2 | 4 | |||||||
Rummeliibacillus | 1 | 1 | |||||||
类芽孢杆菌科 Paenibacillaceae | 短杆菌属Brevibacillus | 1 | 1 | ||||||
梭菌纲 Clostridia | Eubacteriales | 毛螺菌科 Lachnospiraceae | 毛螺菌属Lachnospira | 1 | 1 | ||||
放线菌门 | 放线菌纲 | 微球菌目 | Dermabacteraceae | Brachybacterium | 1 | 1 | |||
Actinomycetota | Actinomycetes | Micrococcales | 微杆菌科 | Agrococcus | 1 | 1 | |||
Microbacteriaceae | 微杆菌属Microbacterium | 8 | 9 | ||||||
Micromonosporales | 小单孢菌科 Micromonosporaceae | 小单孢菌属Micromonospora | 2 | 5 | |||||
分枝杆菌目 Mycobacteriales | Mycobacteriaceae 链霉菌科 | 分枝杆菌属Mycolicibacterium 链霉菌属Streptomyces | 6 4 | 13 4 | |||||
Kitasatosporales | Streptomycetaceae |
菌株编码 Strain No. | 最相似菌株的种属名(登录号) The closest typical strain (Accession No.) | 序列相似度 Sequence similarity/% |
---|---|---|
1-2-14 | Flavobacterium cupreum CCM 8825T(MH100899) | 98.20 |
1-1-6 | Flavobacterium ureilyticum S-42T(KY117464) | 97.18 |
1-2-20 | Simplicispira lacusdiani CPCC 100842T(MG708102) | 98.55 |
1-2-29 | Rheinheimera chironomi K19414T(DQ298025) | 98.46 |
2-1-14 | Novosphingobium taihuense T3-B9T(AY500142) | 97.93 |
2-1-18 | Flavobacterium buctense T7T(KP744923) | 97.90 |
3-2-16 | Flavobacterium phycosphaerae MK012T(MN559947) | 97.64 |
4-1-13 | Flavobacterium dankookense DSM 25687T(jgi.1108032) | 97.63 |
4-2-2 | Flavobacterium granuli DSM 17797T(jgi.1107693) | 98.54 |
4-2-7 | Flavobacterium terrigena DSM 17934T(FNYA01000017) | 97.63 |
4-2-9 | Flavobacterium saccharophilum DSM 1811T(jgi.1107675) | 97.63 |
5-2-2 | Flavobacterium silvisoli RD-2-33T(SJPE01000025) | 98.15 |
D-12 | Flavobacterium cheonhonense ARSA-15T(GU295972) | 97.32 |
E-18 | Caulobacter soli Ji-3-8T(MT026974) | 94.19 |
T1-10 | Flavobacterium cheniae NJ-26T(EF407880) | 97.65 |
T2-8 | Rheinheimera aquatica GR5T(GQ168584) | 98.40 |
T2-10 | Flavobacterium filum EMB34T(DQ372981) | 97.87 |
T5-7 | Flavobacterium tiangeerense 563T(EU036219) | 96.55 |
H1-31 | Ralstonia mannitolilytica LMG 6866T(AJ270258) | 98.38 |
H5-31 | Aquincola tertiaricarbonis L10T(DQ656489) | 98.55 |
表2 16S rRNA基因序列相似性低于98.60%的20株分离菌株的基本情况
Table 2 Basic information of the isolates with 16S rRNA gene sequence similarity smaller than 98.60%
菌株编码 Strain No. | 最相似菌株的种属名(登录号) The closest typical strain (Accession No.) | 序列相似度 Sequence similarity/% |
---|---|---|
1-2-14 | Flavobacterium cupreum CCM 8825T(MH100899) | 98.20 |
1-1-6 | Flavobacterium ureilyticum S-42T(KY117464) | 97.18 |
1-2-20 | Simplicispira lacusdiani CPCC 100842T(MG708102) | 98.55 |
1-2-29 | Rheinheimera chironomi K19414T(DQ298025) | 98.46 |
2-1-14 | Novosphingobium taihuense T3-B9T(AY500142) | 97.93 |
2-1-18 | Flavobacterium buctense T7T(KP744923) | 97.90 |
3-2-16 | Flavobacterium phycosphaerae MK012T(MN559947) | 97.64 |
4-1-13 | Flavobacterium dankookense DSM 25687T(jgi.1108032) | 97.63 |
4-2-2 | Flavobacterium granuli DSM 17797T(jgi.1107693) | 98.54 |
4-2-7 | Flavobacterium terrigena DSM 17934T(FNYA01000017) | 97.63 |
4-2-9 | Flavobacterium saccharophilum DSM 1811T(jgi.1107675) | 97.63 |
5-2-2 | Flavobacterium silvisoli RD-2-33T(SJPE01000025) | 98.15 |
D-12 | Flavobacterium cheonhonense ARSA-15T(GU295972) | 97.32 |
E-18 | Caulobacter soli Ji-3-8T(MT026974) | 94.19 |
T1-10 | Flavobacterium cheniae NJ-26T(EF407880) | 97.65 |
T2-8 | Rheinheimera aquatica GR5T(GQ168584) | 98.40 |
T2-10 | Flavobacterium filum EMB34T(DQ372981) | 97.87 |
T5-7 | Flavobacterium tiangeerense 563T(EU036219) | 96.55 |
H1-31 | Ralstonia mannitolilytica LMG 6866T(AJ270258) | 98.38 |
H5-31 | Aquincola tertiaricarbonis L10T(DQ656489) | 98.55 |
菌株编码 Strain No. | 相似菌株种属名(登录号) The closest typical strain (Accession No.) | 序列相似度 Sequence similarity/% | 抑制率 Inhibition rate/% |
---|---|---|---|
C-1 | Priestia aryabhattai B8W22T(EF114313) | 100.00 | 42.75±1.74 |
2-1-3 | Flavobacterium granuli DSM 17797T(jgi.1107693) | 99.40 | 45.01±2.70 |
H4-20 | Sphingomonas leidyi ATCC 15260T(AJ227812) | 99.88 | 47.80±1.41 |
H1-13 | Inhella inkyongensis IMCC1713T(DQ664238) | 99.43 | 58.75±2.55 |
T3-11 | Brevundimonas terrae KSL-145T(DQ335215) | 99.33 | 64.37±6.43 |
A-1 | Fictibacillus barbaricus V2-BIII-A2T(AJ422145) | 100.00 | 65.89±0.85 |
1-2-14 | Flavobacterium cupreum CCM 8825T(MH100899) | 98.20 | 71.52±1.26 |
表3 不同菌株对铜绿微囊藻的溶藻率
Table 3 The algicidal ratio of different strains against Microcystis aeruginosa
菌株编码 Strain No. | 相似菌株种属名(登录号) The closest typical strain (Accession No.) | 序列相似度 Sequence similarity/% | 抑制率 Inhibition rate/% |
---|---|---|---|
C-1 | Priestia aryabhattai B8W22T(EF114313) | 100.00 | 42.75±1.74 |
2-1-3 | Flavobacterium granuli DSM 17797T(jgi.1107693) | 99.40 | 45.01±2.70 |
H4-20 | Sphingomonas leidyi ATCC 15260T(AJ227812) | 99.88 | 47.80±1.41 |
H1-13 | Inhella inkyongensis IMCC1713T(DQ664238) | 99.43 | 58.75±2.55 |
T3-11 | Brevundimonas terrae KSL-145T(DQ335215) | 99.33 | 64.37±6.43 |
A-1 | Fictibacillus barbaricus V2-BIII-A2T(AJ422145) | 100.00 | 65.89±0.85 |
1-2-14 | Flavobacterium cupreum CCM 8825T(MH100899) | 98.20 | 71.52±1.26 |
图1 菌株 1-2-14对铜绿微囊藻的溶藻效果照片(A)及抑制率(B) CK,空白对照。T,加菌处理。
Fig.1 Algicidal effect photos (A) and inhibition rate (B) of strain 1-2-14 cultures to Microcystis aeruginosa CK, Blank control; T, Treatment with strain 1-2-14.
化合物 Compound | 不同浓度(mg·L-1)处理48 h的抑藻率The inhibition rates under different concentration(mg·L-1) treatment for 48 h | ||
---|---|---|---|
0.5 | 1 | 2 | |
1 | 20.34±2.13 | 40.27±2.99 | 56.87±1.67 |
2 | 24.11±2.07 | 47.65±3.89 | 67.81±3.35 |
表4 不同化合物对铜绿微囊藻的抑藻率
Table 4 The inhibition rates of different compounds against Microcystis aeruginosa%
化合物 Compound | 不同浓度(mg·L-1)处理48 h的抑藻率The inhibition rates under different concentration(mg·L-1) treatment for 48 h | ||
---|---|---|---|
0.5 | 1 | 2 | |
1 | 20.34±2.13 | 40.27±2.99 | 56.87±1.67 |
2 | 24.11±2.07 | 47.65±3.89 | 67.81±3.35 |
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