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Molecular cloning and bioinformatics analysis of SgP5CS gene in Suaeda glauca

  

  1. (1. Institute of Crops and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Science, Hangzhou 310021, China;2. Seed Management Station of Xiaoshan District, Hangzhou 311201, China)
  • Online:2016-03-25 Published:2016-04-07

Abstract: A new gene, named as SgP5CS, was cloned by homologous cloning method from Suaeda glauca. Bioinformatics analysis showed that the open reading frame of SgP5CS gene was 2 151 bp, encoding 716 amino acids. The isoelectric point and the relative molecular weight of coded protein were 5.71 and 77.4318 u, respectively. Hydrophobic analysis indicated that SgP5CS was a hydrophilic protein and had no transmembrane domain. Nucleotide sequence Blast by ClustalX indicated that the coded protein of SgP5CS shared an identity of 93% with P5CS of Salicornia europaea. Δ1pyrroline5carboxylate synthetase (P5CS) is a key enzyme in the synthesis of proline which is one of the important osmotic regulators in plants. Our research laid a foundation to further study the P5CS function in Suaeda glauca.

Key words: Suaeda glauca, P5CS, proline