浙江农业学报 ›› 2021, Vol. 33 ›› Issue (10): 1817-1825.DOI: 10.3969/j.issn.1004-1524.2021.10.04
收稿日期:
2020-09-03
出版日期:
2021-10-25
发布日期:
2021-11-02
作者简介:
姬凯元(1987—),男,山东烟台人,博士,讲师,从事临床兽医学研究。E-mail: 18234487253@163.com
基金资助:
JI Kaiyuan(), QIU Yueyang, CHENG Ao, JIANG Shudong, PENG Mengling
Received:
2020-09-03
Online:
2021-10-25
Published:
2021-11-02
摘要:
为掌握安徽地区犬细小病毒(CPV)的遗传变异情况,采用PCR法扩增2018—2019年安徽地区收集的10株CPV全基因组,采用生物信息学分析安徽地区CPV遗传进化特点与VP2抗原的变异情况。遗传进化分析发现,安徽地区分离的10株CPV主要以CPV-2c亚型为主,起源于CPV-2aB004(EF011664)和CPV-LZ1(JQ268283)株,正在形成一个独立的分支;NS1基因和VP2基因在遗传进化分支中出现不同步现象,为CPV基因重组提供了依据。VP2蛋白保守性分析发现,安徽分离的CPV毒株的VP2蛋白存在部分氨基酸位点的突变,是否对VP2蛋白的结构和功能产生影响需进一步探究。本研究通过分析安徽地区CPV的遗传进化特点与VP2蛋白氨基酸位点突变特征,为CPV的研究提供了参考。
中图分类号:
姬凯元, 邱月阳, 程敖, 蒋书东, 彭梦玲. 安徽合肥地区2018—2019年犬细小病毒遗传进化分析[J]. 浙江农业学报, 2021, 33(10): 1817-1825.
JI Kaiyuan, QIU Yueyang, CHENG Ao, JIANG Shudong, PENG Mengling. Genetic diversity of Canine parvovirus in Hefei, Anhui Province from 2018 to 2019[J]. Acta Agriculturae Zhejiangensis, 2021, 33(10): 1817-1825.
引物名称 Primer name | 序列 Sequence(5'-3') | 位置 Location | 产物大小 Product size/bp |
---|---|---|---|
CPV-F | CAGGTGATG AATTTGCTACA | 3 553-4 583 | 1 031 |
CPV-R | AATCTTAAAATAATATGTAATAAAC | ||
Y1-F | ATTCTTTAGAACCAACTGACCAA | 1-56 | 56 |
Y1-R | CAGCGCGCGTCATCACGTCAT | ||
Y2-F | GCTGCGCGCGCTGCCTAC | 53-764 | 712 |
Y2-R | TACCGAACAAAGAGTCACCAACCA | ||
C1-F | AAATGGACTGGGAATCGG | 490-2 467 | 1 978 |
C1-R | GCGGCGTCAGAAGGGTTA | ||
C2-F | AGTCCAACGTGGTCCGAAAT | 2 187-3 647 | 1 461 |
C2-R | TGGTAAGCCCAATGCTCTAT | ||
C3-F | ACTCCAGCAGCTATGAGA | 3 339-4 528 | 1 118 |
C3-R | TTTCTAGGTGCTAGTTGAG | ||
U1-F | GCTAAACTAAGAGCCTCTCATACTTGGAATCC | 4 392-4 964 | 573 |
U1-R | CATAGCGGTCTGGTTGATTAAG CA | ||
U2-F | CTATGCGGTCTGGTTGATTAAGCG | 4 960-5 059 | 100 |
U2-R | TAGTATCAATCTGTCTTTAAGGGGGG |
表1 鉴定与全基因组序列扩增引物
Table 2 Primers for identification and complete genome sequence amplification
引物名称 Primer name | 序列 Sequence(5'-3') | 位置 Location | 产物大小 Product size/bp |
---|---|---|---|
CPV-F | CAGGTGATG AATTTGCTACA | 3 553-4 583 | 1 031 |
CPV-R | AATCTTAAAATAATATGTAATAAAC | ||
Y1-F | ATTCTTTAGAACCAACTGACCAA | 1-56 | 56 |
Y1-R | CAGCGCGCGTCATCACGTCAT | ||
Y2-F | GCTGCGCGCGCTGCCTAC | 53-764 | 712 |
Y2-R | TACCGAACAAAGAGTCACCAACCA | ||
C1-F | AAATGGACTGGGAATCGG | 490-2 467 | 1 978 |
C1-R | GCGGCGTCAGAAGGGTTA | ||
C2-F | AGTCCAACGTGGTCCGAAAT | 2 187-3 647 | 1 461 |
C2-R | TGGTAAGCCCAATGCTCTAT | ||
C3-F | ACTCCAGCAGCTATGAGA | 3 339-4 528 | 1 118 |
C3-R | TTTCTAGGTGCTAGTTGAG | ||
U1-F | GCTAAACTAAGAGCCTCTCATACTTGGAATCC | 4 392-4 964 | 573 |
U1-R | CATAGCGGTCTGGTTGATTAAG CA | ||
U2-F | CTATGCGGTCTGGTTGATTAAGCG | 4 960-5 059 | 100 |
U2-R | TAGTATCAATCTGTCTTTAAGGGGGG |
毒株 Strain | 登录号 GenBank accession number | 亚型 Type | 地区 Area | 年份 Year |
---|---|---|---|---|
CPV-LZ2 | JQ268284 | New-CPV-2b | 兰州Lanzhou | 2011 |
CPV-GX1 | JQ686671 | New-CPV-2a | 广西Guangxi | 2011 |
CPV-JS2 | KF676668 | New-CPV-2a | 南京Nanjing | 2013 |
CPV-SC02 | JX660690 | New-CPV-2a | 中国China | 2011 |
CPV-s5 | KF638400 | New-CPV-2a | 深圳Shenzhen | 2010 |
CPV-LZ1 | JQ268283 | New-CPV-2a | 兰州Lanzhou | 2011 |
CPV-B004 | EF011664 | New-CPV-2a | 中国China | 2004 |
CPV-OH20219 | MF457594 | CPV-2c | 美国America | 2015 |
CPV-UFMT | KY073269 | CPV-2c | 巴西Brazil | 2015 |
CPV-UY47 | KM457104 | CPV-2c | 巴西Brazil | 2015 |
CPV-411b.us.98 | EU659121 | New-CPV-2b | 美国Brazil | 1988 |
CPV-447 | AY742934 | New-CPV-2b | 德国Germany | 1995 |
CPV-LaiKa-1993 | JN033694 | New-CPV-2b | 俄罗斯Russia | 1993 |
CPV-Raccoon-349-08 | JN867617 | New-CPV-2a | 美国America | 2008 |
CPV-Raccoon-GA-287-08 | JN867615 | New-CPV-2a | 美国America | 2009 |
CPV-b | M38245 | CPV-2 | 美国America | 1988 |
CPV-5.us.79 | EU659116 | CPV-2 | 美国America | 1979 |
CPV-Raccoon-TN-351-09 | JN867612 | New-CPV-2a | 美国America | 2009 |
CPV-Raccoon-VA-118-A-07 | JN867610 | New-CPV-2a | 美国America | 2007 |
CPV-Raccoon-KY-358-B-09 | JN867611 | New-CPV-2a | 美国America | 2009 |
CPV-SC-7 | MH476581 | CPV-2c | 四川Sichuan | 2017 |
CPV-5MGL | MH660909 | CPV-2c | 内蒙古 Inner Mongolia | 2017 |
CPV-HCM7 | LC214969 | CPV-2c | 越南Vietnam | 2013 |
CPV-SC-9 | MF805792 | CPV-2c | 四川Sichuan | 2016 |
CPV-SC-3 | MF805796 | CPV-2c | 四川Sichuan | 2016 |
CPV-CU21 | MH711902 | CPV-2c | 泰国Thailand | 2016 |
CPV-SH1516 | MG013488 | CPV-2c | 上海Shanghai | 2016 |
CPV-U6 | AY742935 | CPV-2a | 法国France | 2016 |
表2 CPV-2参考毒株
Table 2 Reference sequences of CPV-2 strains
毒株 Strain | 登录号 GenBank accession number | 亚型 Type | 地区 Area | 年份 Year |
---|---|---|---|---|
CPV-LZ2 | JQ268284 | New-CPV-2b | 兰州Lanzhou | 2011 |
CPV-GX1 | JQ686671 | New-CPV-2a | 广西Guangxi | 2011 |
CPV-JS2 | KF676668 | New-CPV-2a | 南京Nanjing | 2013 |
CPV-SC02 | JX660690 | New-CPV-2a | 中国China | 2011 |
CPV-s5 | KF638400 | New-CPV-2a | 深圳Shenzhen | 2010 |
CPV-LZ1 | JQ268283 | New-CPV-2a | 兰州Lanzhou | 2011 |
CPV-B004 | EF011664 | New-CPV-2a | 中国China | 2004 |
CPV-OH20219 | MF457594 | CPV-2c | 美国America | 2015 |
CPV-UFMT | KY073269 | CPV-2c | 巴西Brazil | 2015 |
CPV-UY47 | KM457104 | CPV-2c | 巴西Brazil | 2015 |
CPV-411b.us.98 | EU659121 | New-CPV-2b | 美国Brazil | 1988 |
CPV-447 | AY742934 | New-CPV-2b | 德国Germany | 1995 |
CPV-LaiKa-1993 | JN033694 | New-CPV-2b | 俄罗斯Russia | 1993 |
CPV-Raccoon-349-08 | JN867617 | New-CPV-2a | 美国America | 2008 |
CPV-Raccoon-GA-287-08 | JN867615 | New-CPV-2a | 美国America | 2009 |
CPV-b | M38245 | CPV-2 | 美国America | 1988 |
CPV-5.us.79 | EU659116 | CPV-2 | 美国America | 1979 |
CPV-Raccoon-TN-351-09 | JN867612 | New-CPV-2a | 美国America | 2009 |
CPV-Raccoon-VA-118-A-07 | JN867610 | New-CPV-2a | 美国America | 2007 |
CPV-Raccoon-KY-358-B-09 | JN867611 | New-CPV-2a | 美国America | 2009 |
CPV-SC-7 | MH476581 | CPV-2c | 四川Sichuan | 2017 |
CPV-5MGL | MH660909 | CPV-2c | 内蒙古 Inner Mongolia | 2017 |
CPV-HCM7 | LC214969 | CPV-2c | 越南Vietnam | 2013 |
CPV-SC-9 | MF805792 | CPV-2c | 四川Sichuan | 2016 |
CPV-SC-3 | MF805796 | CPV-2c | 四川Sichuan | 2016 |
CPV-CU21 | MH711902 | CPV-2c | 泰国Thailand | 2016 |
CPV-SH1516 | MG013488 | CPV-2c | 上海Shanghai | 2016 |
CPV-U6 | AY742935 | CPV-2a | 法国France | 2016 |
图1 CPV PCR鉴定结果 M,DL2000 marker;1~8,CPV-AH1~8;9,空白;10,阴性对照。
Fig.1 PCR identification results of CPV M, DL2000 marker; 1-8, CPV-AH1-8; 9, Blank; 10, Negative control.
病毒Strain | 分离地点Area | VP2-297 aa | VP2-426 aa | 亚型Type |
---|---|---|---|---|
AHmas 1 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 2 | 马鞍山Maanshan | Ala | Asn | New CPV-2a |
AHmas 3 | 马鞍山Maanshan | Ala | Asp | New CPV-2b |
AHmas 4 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 6 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 9 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 11 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 12 | 马鞍山Maanshan | Ala | Asn | New CPV-2a |
AHmas 16 | 马鞍山Maanshan | Ala | Asn | New CPV-2a |
AHmas 17 | 马鞍山Maanshan | Ala | Asn | New CPV-2a |
AHmas 18 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHhf 1 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 2 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 5 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 6 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 7 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 13 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 15 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 19 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 20 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 21 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 22 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 23 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 24 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 27 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 28 | 合肥Hefei | Ala | Glu | CPV-2c |
AHcf 1 | 长丰Changfeng | Ala | Glu | CPV-2c |
AHcf 2 | 长丰Changfeng | Ala | Glu | CPV-2c |
AHcf 3 | 长丰Changfeng | Ala | Glu | CPV-2c |
AHcf 4 | 长丰Changfeng | Ala | Glu | CPV-2c |
AHcf 5 | 长丰Changfeng | Ala | Glu | CPV-2c |
表3 CPV安徽分离株关键氨基酸位点信息
Table 3 Key amino acid loci of CPV strains in Anhui
病毒Strain | 分离地点Area | VP2-297 aa | VP2-426 aa | 亚型Type |
---|---|---|---|---|
AHmas 1 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 2 | 马鞍山Maanshan | Ala | Asn | New CPV-2a |
AHmas 3 | 马鞍山Maanshan | Ala | Asp | New CPV-2b |
AHmas 4 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 6 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 9 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 11 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHmas 12 | 马鞍山Maanshan | Ala | Asn | New CPV-2a |
AHmas 16 | 马鞍山Maanshan | Ala | Asn | New CPV-2a |
AHmas 17 | 马鞍山Maanshan | Ala | Asn | New CPV-2a |
AHmas 18 | 马鞍山Maanshan | Ala | Glu | CPV-2c |
AHhf 1 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 2 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 5 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 6 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 7 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 13 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 15 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 19 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 20 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 21 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 22 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 23 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 24 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 27 | 合肥Hefei | Ala | Glu | CPV-2c |
AHhf 28 | 合肥Hefei | Ala | Glu | CPV-2c |
AHcf 1 | 长丰Changfeng | Ala | Glu | CPV-2c |
AHcf 2 | 长丰Changfeng | Ala | Glu | CPV-2c |
AHcf 3 | 长丰Changfeng | Ala | Glu | CPV-2c |
AHcf 4 | 长丰Changfeng | Ala | Glu | CPV-2c |
AHcf 5 | 长丰Changfeng | Ala | Glu | CPV-2c |
毒株Strain | 3'UTR/bp | NS1/bp | NS2/bp | VP1/bp | VP2/bp | 5'UTR/bp |
---|---|---|---|---|---|---|
AHmas 3 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 060 |
AHmas 17 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 061 |
AHhf 1 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 061 |
AHmas 9 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 061 |
AHcf 4 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 061 |
AHmas 2 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 055 |
AHhf 7 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 058 |
AHhf 27 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 058 |
AHhf 28 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 058 |
AHmas 16 | 1-269 | 270-2 276 | 270-529 | 2 387-4 539 | 2 785-4 539 | 4 540-5 059 |
表4 10株CPV安徽株基因组结构分析
Table 4 Genome structure of 10 strains CPV Anhui isolated
毒株Strain | 3'UTR/bp | NS1/bp | NS2/bp | VP1/bp | VP2/bp | 5'UTR/bp |
---|---|---|---|---|---|---|
AHmas 3 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 060 |
AHmas 17 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 061 |
AHhf 1 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 061 |
AHmas 9 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 061 |
AHcf 4 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 061 |
AHmas 2 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 055 |
AHhf 7 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 058 |
AHhf 27 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 058 |
AHhf 28 | 1-269 | 270-2 276 | 270-529 | 2 386-4 538 | 2 784-4 538 | 4 539-5 058 |
AHmas 16 | 1-269 | 270-2 276 | 270-529 | 2 387-4 539 | 2 785-4 539 | 4 540-5 059 |
毒株 Strain | 分型 Type | 氨基酸突变位点Amino acid mutation sites | ||||||
---|---|---|---|---|---|---|---|---|
5 | 13 | 267 | 324 | 370 | 426 | 440 | ||
AHmas2 | New-CPV-2a | Gly | Ser | — | — | Arg | Glu | — |
AHmas16 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
AHmas17 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-GX1 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-JS2 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-SC02 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-s5 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-LZ1 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-B004 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-349-08 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-GA-287-08 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-TN-351-09 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-VA-118-A-07 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-KY-358-B-09 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
AHmas3 | New-CPV-2b | — | — | Tyr | Ile | — | — | Ala |
CPV-411b.us.98 | New-CPV-2b | — | — | Phe | Tyr | — | — | Thr |
CPV-447 | New-CPV-2b | — | — | Phe | Tyr | — | — | Thr |
CPV-LZ2 | New-CPV-2b | — | — | Tyr | Ile | — | — | Ala |
CPV-LaiKa-1993 | New-CPV-2b | — | — | — | — | — | — | — |
表5 VP2蛋白氨基酸突变位点统计表
Table 5 Statistical results of VP2 protein amino acid mutation sites
毒株 Strain | 分型 Type | 氨基酸突变位点Amino acid mutation sites | ||||||
---|---|---|---|---|---|---|---|---|
5 | 13 | 267 | 324 | 370 | 426 | 440 | ||
AHmas2 | New-CPV-2a | Gly | Ser | — | — | Arg | Glu | — |
AHmas16 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
AHmas17 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-GX1 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-JS2 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-SC02 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-s5 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-LZ1 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-B004 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-349-08 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-GA-287-08 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-TN-351-09 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-VA-118-A-07 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
CPV-Raccoon-KY-358-B-09 | New-CPV-2a | Ala | Pro | — | — | Gln | Asn | — |
AHmas3 | New-CPV-2b | — | — | Tyr | Ile | — | — | Ala |
CPV-411b.us.98 | New-CPV-2b | — | — | Phe | Tyr | — | — | Thr |
CPV-447 | New-CPV-2b | — | — | Phe | Tyr | — | — | Thr |
CPV-LZ2 | New-CPV-2b | — | — | Tyr | Ile | — | — | Ala |
CPV-LaiKa-1993 | New-CPV-2b | — | — | — | — | — | — | — |
[1] | MIRA F, DOWGIER G, PURPARI G, et al. Molecular typing of a novel canine parvovirus type 2a mutant circulating in Italy[J]. Infection, Genetics and Evolution, 2018, 61:67-73. |
[2] | SHACKELTON L A, PARRISH C R, TRUYEN U, et al. High rate of viral evolution associated with the emergence of carnivore parvovirus[J]. Proceedings of the National Academy of Sciences of the United States of America, 2005, 102(2):379-384. |
[3] |
PARRISH C, O'CONNELL P, EVERMANN J, et al. Natural variation of canine parvovirus[J]. Science, 1985, 230(4729):1046-1048.
DOI URL |
[4] |
PARRISH C R, AQUADRO C F, STRASSHEIM M L, et al. Rapid antigenic-type replacement and DNA sequence evolution of canine parvovirus[J]. Journal of Virology, 1991, 65(12):6544-6552.
DOI URL |
[5] |
BUONAVOGLIA C, MARTELLA V, PRATELLI A, et al. Evidence for evolution of canine parvovirus type 2 in Italy[J]. Journal of General Virology, 2001, 82(12):3021-3025.
DOI URL |
[6] |
GENG Y F, GUO D H, LI C Q, et al. Co-circulation of the rare CPV-2c with unique Gln370Arg substitution, new CPV-2b with unique Thr440Ala substitution, and new CPV-2a with high prevalence and variation in Heilongjiang Province, northeast China[J]. PLoS One, 2015, 10(9):e0137288.
DOI URL |
[7] | MARTINET B, MORALES M C, MÄHL P. Comparison of a new CPV-2b vaccine with three conventional CPV-2 vaccines for immunization of dogs against canine parvovirus[J]. Kleintierpraxis, 2006, 51(1):33-37. |
[8] |
MIN J Y, LI S D, SEN G C, et al. A site on the influenza A virus NS1 protein mediates both inhibition of PKR activation and temporal regulation of viral RNA synjournal[J]. Virology, 2007, 363(1):236-243.
DOI URL |
[9] | COTMORE S F, TATTERSALL P. The autonomously replicating parvoviruses of vertebrates[J]. Advances in Virus Research, 1987, 33:91-174. |
[10] |
HOELZER K, SHACKELTON L A, PARRISH C R, et al. Phylogenetic analysis reveals the emergence, evolution and dispersal of carnivore parvoviruses[J]. The Journal of General Virology, 2008, 89(Pt 9):2280-2289.
DOI URL |
[11] |
HAN S C, GUO H C, SUN S Q, et al. Full-length genomic characterizations of two canine parvoviruses prevalent in Northwest China[J]. Archives of Microbiology, 2015, 197(4):621-626.
DOI URL |
[12] |
ZHUANG Q Y, QIU Y, PAN Z H, et al. Genome sequence characterization of canine parvoviruses prevalent in the Sichuan Province of China[J]. Transboundary and Emerging Diseases, 2019, 66(2):897-907.
DOI URL |
[13] |
YU Y L, ZHANG J L, WANG J G, et al. Naturally-occurring right terminal hairpin mutations in three genotypes of canine parvovirus (CPV-2a, CPV-2b and CPV-2c) have no effect on their growth characteristics[J]. Virus Research, 2019, 261:31-36.
DOI URL |
[14] |
HORIUCHI M, GOTO H, ISHIGURO N, et al. Mapping of determinants of the host range for canine cells in the genome of canine parvovirus using canine parvovirus/mink enteritis virus chimeric viruses[J]. Journal of General Virology, 1994, 75(6):1319-1328.
DOI URL |
[15] | TEMUUJIN U, TSERENDORJ A, FUJIKI J, et al. The first isolation and identification of canine parvovirus (CPV) type 2c variants during 2016-2018 genetic surveillance of dogs in Mongolia[J]. Infection, Genetics and Evolution, 2019, 73:269-275. |
[16] |
HOANG M, LIN W H, LE V P, et al. Molecular epidemiology of canine parvovirus type 2 in Vietnam from November 2016 to February 2018[J]. Virology Journal, 2019, 16(1):52.
DOI URL |
[17] |
VANNAMAHAXAY S, VONGKHAMCHANH S, INTANON M, et al. Molecular characterization of canine parvovirus in Vientiane, Laos[J]. Archives of Virology, 2017, 162(5):1355-1361.
DOI URL |
[18] |
HONG C, DECARO N, DESARIO C, et al. Occurrence of canine parvovirus type 2c in the United States[J]. Journal of Veterinary Diagnostic Investigation, 2007, 19(5):535-539.
DOI URL |
[19] |
DECARO N, DESARIO C, ADDIE D D, et al. The study molecular epidemiology of canine parvovirus, Europe[J]. Emerging Infectious Diseases, 2007, 13(8):1222-1224.
DOI URL |
[20] |
CALDERÓN M G, ROMANUTTI C, ANTUONO A D, et al. Evolution of canine parvovirus in Argentina between years 2003 and 2010: CPV2c has become the predominant variant affecting the domestic dog population[J]. Virus Research, 2011, 157(1):106-110.
DOI URL |
[21] |
WU J, GAO X T, HOU S H, et al. Molecular epidemiological and phylogenetic analyses of canine parvovirus in domestic dogs and cats in Beijing, 2010-2013[J]. Journal of Veterinary Medical Science, 2015, 77(10):1305-1310.
DOI URL |
[22] |
ZHAO Z Q, LIU H S, DING K, et al. Occurrence of canine parvovirus in dogs from Henan Province of China in 2009—2014[J]. BMC Veterinary Research, 2016, 12(1):138.
DOI URL |
[23] |
XU J, GUO H C, WEI Y Q, et al. Phylogenetic analysis of canine parvovirus isolates from Sichuan and Gansu provinces of China in 2011[J]. Transboundary and Emerging Diseases, 2015, 62(1):91-95.
DOI URL |
[24] |
ZHAO Y B, LIN Y, ZENG X J, et al. Genotyping and pathobiologic characterization of canine parvovirus circulating in Nanjing, China[J]. Virology Journal, 2013, 10:272.
DOI URL |
[25] | ZHANG Q, XU X M, ZHAI G Q, et al. Molecular characterisation of canine parvovirus strains circulating in China[J]. African Journal of Biotechnology, 2009, 9(29):4556-4560. |
[26] | LARSON L J, SCHULTZ R D. Do two current canine parvovirus type 2 and 2b vaccines provide protection against the new type 2c variant[J]. Veterinary Therapeutics: Research in Applied Veterinary Medicine, 2008, 9(2):94-101. |
[27] | DECARO N, DESARIO C, ELIA G, et al. Evidence for immunisation failure in vaccinated adult dogs infected with canine parvovirus type 2c[J]. The New Microbiologica, 2008, 31(1):125-130. |
[1] | 熊雪, 赵丽娜, 杨森林, SAMIAH Arif, 张屹东. 甜瓜CmCIPK家族全基因组鉴定和逆境条件下的表达分析[J]. 浙江农业学报, 2021, 33(9): 1625-1639. |
[2] | 赵洪喜, 刘继兵. 宁夏部分地区奶牛球虫感染情况调查与遗传进化分析[J]. 浙江农业学报, 2021, 33(8): 1379-1384. |
[3] | 蒲路莎, 苏世博, 陈肖韩, 赵丽丽, 陈洪岩. 鹅源星状病毒ORF2基因原核表达及遗传进化分析[J]. 浙江农业学报, 2020, 32(5): 789-797. |
[4] | 王长进, 徐运林, 程昕昕, 周毅, 余海兵. 甜玉米种子营养品质主要性状全基因组关联分析[J]. 浙江农业学报, 2020, 32(3): 383-389. |
[5] | 徐丽华, 蓝胜芝, 余斌, 李军星, 张鹏超, 李宝臣, 苏菲, 袁秀芳. 浙江地区猪圆环病毒2型检测及遗传变异分析[J]. 浙江农业学报, 2020, 32(11): 1970-1977. |
[6] | 王晓薇, 马青. 滩羊毛色的全基因组关联分析[J]. 浙江农业学报, 2020, 32(1): 28-34. |
[7] | 常江, 罗怡, 唐标, 张玲, 戴贤君, 裘罕琦, 杨华, 夏效东. 一株分离自鸡肉样品的多重耐药大肠埃希菌的全基因组测序及耐药性研究[J]. 浙江农业学报, 2019, 31(8): 1249-1256. |
[8] | 卢鑫, 周靖航, 杨朝云, 张梦华, 叶连萌, 李叔臻, 黄锡霞, 马云, 王兴平, 史远刚. 新疆褐牛产奶和繁殖性状候选基因功能注释[J]. 浙江农业学报, 2019, 31(12): 1987-1995. |
[9] | 吴伟, 冯志娟, 徐盛春, 刘娜, 张古文, 胡齐赞, 龚亚明. 大豆NIP类水孔蛋白基因的鉴定及表达特性分析[J]. 浙江农业学报, 2018, 30(7): 1101-1109. |
[10] | 贾小平, 张博, 全建章, 王永芳, 董志平, 袁玺垒, 李剑峰. 洛阳、吉林生态区谷子抗倒伏性的全基因组关联分析[J]. 浙江农业学报, 2018, 30(12): 1981-1991. |
[11] | 李雨濛, 郭博, 徐逸飞, 陈瑛琪, 蔡瑶, 李小璟, 龚双燕, 徐志文, 朱玲. 四川省腹泻病猪的猪萨佩罗病毒检测及1B基因序列比较分析[J]. 浙江农业学报, 2016, 28(12): 1992-1999. |
[12] | 罗厚强1,宋显章1,*,王清艳1,段龙川1,涂宜强1,付华2. 温州地区犬细小病毒病门诊的流行病学调查[J]. 浙江农业学报, 2014, 26(4): 887-. |
[13] | 蒋明;苗立祥;张豫超;管铭;潘小翠. 大白菜WRKY转录因子的全基因组鉴定与分析[J]. , 2013, 25(5): 0-986. |
阅读次数 | ||||||
全文 |
|
|||||
摘要 |
|
|||||