Acta Agriculturae Zhejiangensis ›› 2022, Vol. 34 ›› Issue (5): 923-933.DOI: 10.3969/j.issn.1004-1524.2022.05.06
• Animal Science • Previous Articles Next Articles
LI Shan(), HUANG Fangyuan, ZHANG Yulong, CAI Dongjie, ZUO Zhicai(
)
Received:
2021-05-06
Online:
2022-05-25
Published:
2022-06-06
Contact:
ZUO Zhicai
CLC Number:
LI Shan, HUANG Fangyuan, ZHANG Yulong, CAI Dongjie, ZUO Zhicai. Isolation, identification and drug resistance of extended spectrum β-lactamases (ESBLs) producing Klebsiella pneumoniae from beef cattle in Sichuan Province, China[J]. Acta Agriculturae Zhejiangensis, 2022, 34(5): 923-933.
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耐药基因 Drug resistance gene | 引物名称和序列 Primer name and sequence(5'-3') | 退火温度 Annealing temperature/ ℃ | 目的片段大小 Target fragment size/bp | 参考文献 Reference |
---|---|---|---|---|
sul1 | sul1-F,GTGACGGTGTTCGGCATTCT; sul1-R,CCGAGAAGGTGATTGCGCT | 60 | 779 | [ |
sul2 | sul2-F,CGGCATCGTCAACATAACCT; sul2-R,TGTGCGGATGAAGTCAGCTC | 57 | 721 | [ |
strA | strA-F,CCTGGTGATAACGGCAATTC; strA-R,CCAACGCAGATAGAAGGC | 55 | 545 | [ |
strB | strB-F,ACGTCAAGGGATTGAAACC; strB-R,GGATCGTAGAACATATTGGC | 53 | 509 | [ |
aph(3')-Ia | aph(3')-Ia-F,ATGGGCTCGCGATAATGTC; aph(3')-Ia-R,CTCACCGAGGCAGTTCCAT | 57 | 600 | [ |
tetA | tetA-F,AGGATCGCTTTCACTGGGAC; tetA-R,CACCCGTTCCACGTTGTTATA | 57 | 395 | [ |
aac(3)-Ⅰ | aac(3)-Ⅰ-F,ACCTACTCCCAACATCAGCC; aac(3)-Ⅰ-R,ATATAGATCTCACTACGCGC | 55 | 169 | [ |
aac(3)-Ⅱ | aac(3)-Ⅱ-F,ACTGTGATGGGATACGCGTC; aac(3)-Ⅱ-R,CTCCGTCAGCGTTTCAGCTA | 55 | 237 | [ |
aac(6')-Ⅰb | aac(6')-Ⅰb-F,ATGACTGAGCATGACCTTGC; aac(6')-Ⅰb-R,TTAGGCATCACTGCGTGTTC | 55 | 519 | [ |
BlaTEM | TEM-F,ATAAAATTCTTGAAGACGAAA; TEM-R,GACAGTTACCAATGCTTAATCA | 58 | 1 080 | [ |
BlaSHV | SHV-F,GGGTTATTCTTATTTGTCGC; SHV-R,TTAGCGTTGCCAGTGCTC | 60 | 928 | [ |
BlaCTX-M | CTX-M-F,ACGCTGTTGTTAGGAAGTG; CTX-M-R,TTGAGGCTGGGTGAAGT | 58 | 759 | [ |
BlaCTX-M-1 | blaCTX-M-1-F,ATGGTTAAAAAATCACTGCGC; blaCTX-M-1-R,TCCCGACGGCTTTCCGCCTT | 55 | 833 | [ |
BlaCTX-M-2 | blaCTX-M-2-F,ATGATGACTCAGAGCATTCG; blaCTX-M-2-R,TCCCGACGGCTTTCCGCCTT | 55 | 833 | [ |
BlaCTX-M-9 | blaCTX-M-9-F,CGGCCTGTATTTCGCTGTTG; blaCTX-M-9-R,TCCCGACGGCTTTCCGCCTT | 55 | 793 | [ |
Table 1 Information of primers used for amplification of drug resistance genes
耐药基因 Drug resistance gene | 引物名称和序列 Primer name and sequence(5'-3') | 退火温度 Annealing temperature/ ℃ | 目的片段大小 Target fragment size/bp | 参考文献 Reference |
---|---|---|---|---|
sul1 | sul1-F,GTGACGGTGTTCGGCATTCT; sul1-R,CCGAGAAGGTGATTGCGCT | 60 | 779 | [ |
sul2 | sul2-F,CGGCATCGTCAACATAACCT; sul2-R,TGTGCGGATGAAGTCAGCTC | 57 | 721 | [ |
strA | strA-F,CCTGGTGATAACGGCAATTC; strA-R,CCAACGCAGATAGAAGGC | 55 | 545 | [ |
strB | strB-F,ACGTCAAGGGATTGAAACC; strB-R,GGATCGTAGAACATATTGGC | 53 | 509 | [ |
aph(3')-Ia | aph(3')-Ia-F,ATGGGCTCGCGATAATGTC; aph(3')-Ia-R,CTCACCGAGGCAGTTCCAT | 57 | 600 | [ |
tetA | tetA-F,AGGATCGCTTTCACTGGGAC; tetA-R,CACCCGTTCCACGTTGTTATA | 57 | 395 | [ |
aac(3)-Ⅰ | aac(3)-Ⅰ-F,ACCTACTCCCAACATCAGCC; aac(3)-Ⅰ-R,ATATAGATCTCACTACGCGC | 55 | 169 | [ |
aac(3)-Ⅱ | aac(3)-Ⅱ-F,ACTGTGATGGGATACGCGTC; aac(3)-Ⅱ-R,CTCCGTCAGCGTTTCAGCTA | 55 | 237 | [ |
aac(6')-Ⅰb | aac(6')-Ⅰb-F,ATGACTGAGCATGACCTTGC; aac(6')-Ⅰb-R,TTAGGCATCACTGCGTGTTC | 55 | 519 | [ |
BlaTEM | TEM-F,ATAAAATTCTTGAAGACGAAA; TEM-R,GACAGTTACCAATGCTTAATCA | 58 | 1 080 | [ |
BlaSHV | SHV-F,GGGTTATTCTTATTTGTCGC; SHV-R,TTAGCGTTGCCAGTGCTC | 60 | 928 | [ |
BlaCTX-M | CTX-M-F,ACGCTGTTGTTAGGAAGTG; CTX-M-R,TTGAGGCTGGGTGAAGT | 58 | 759 | [ |
BlaCTX-M-1 | blaCTX-M-1-F,ATGGTTAAAAAATCACTGCGC; blaCTX-M-1-R,TCCCGACGGCTTTCCGCCTT | 55 | 833 | [ |
BlaCTX-M-2 | blaCTX-M-2-F,ATGATGACTCAGAGCATTCG; blaCTX-M-2-R,TCCCGACGGCTTTCCGCCTT | 55 | 833 | [ |
BlaCTX-M-9 | blaCTX-M-9-F,CGGCCTGTATTTCGCTGTTG; blaCTX-M-9-R,TCCCGACGGCTTTCCGCCTT | 55 | 793 | [ |
基因 Gene | 引物名称和序列 Primer name and sequence(5'-3') | 退火温度 Annealing temperature/ ℃ | 目的片段大小 Target fragment size/bp | 参考文献 Reference |
---|---|---|---|---|
K1 | K1-F,GGTGCTCTTTACATCATTGC; K1-R,GCAATGGCCATTTGCGTTAG | 55 | 1 283 | [ |
K2 | K2-F,GACCCGATATTCATACTTGACAGAG; K2-R,CCTGAAGTAAAATCGTAAATAGATGGC | 57 | 641 | [ |
K5 | K5-F,TGGTAGTGATGCTCGCGA; K5-R,CCTGAACCCACCCCAATC | 56 | 280 | [ |
K20 | K20-F,CGGTGCTACAGTGCATCATT; K20-R,GTTATACGATGCTCAGTCGC | 57 | 741 | [ |
K54 | K54-F,CATTAGCTCAGTGGTTTGGCT; K54-R,GCTTGACAAACACCATAGCAG | 58 | 881 | [ |
K57 | K57-F,CTCAGGGCTAGAAGTGTCAT; K57-R,CACTAACCCAGAAAGTCGAG | 60 | 1 037 | [ |
wabG | wabG-F,ATGAGTAAATTCAGGCTGGCTCTG; wabG-R,TTATTTCACCAGATCCTGATAAAGAGAAAG | 57 | 1 128 | [ |
mrkD | mrkD-F,ATGTCGCTGAGGAAATTACTAACGC; mrkD-R,TTAATCGTACGTCAGGTTAAAGATCAT | 57 | 996 | [ |
rmpA | rmpA-F,ACTGGGCTACCTCTGCTTCA; rmpA-R,CTTGCATGAGCCATCTTTCA | 55 | 516 | [ |
ureA | ureA-F,GCTGACTTAAGAGAACGTTATG; ureA-R,GATCATGGCGCTACCTCTA | 51 | 337 | [ |
fimH | fimH-F,GCTCTGGCCGATACTACCACGG; fimH-R,GCGAAATAACGTGCCTGGAACGG | 60 | 425 | [ |
Table 2 Information of primers used for detection of capsular serotype and virulence genes
基因 Gene | 引物名称和序列 Primer name and sequence(5'-3') | 退火温度 Annealing temperature/ ℃ | 目的片段大小 Target fragment size/bp | 参考文献 Reference |
---|---|---|---|---|
K1 | K1-F,GGTGCTCTTTACATCATTGC; K1-R,GCAATGGCCATTTGCGTTAG | 55 | 1 283 | [ |
K2 | K2-F,GACCCGATATTCATACTTGACAGAG; K2-R,CCTGAAGTAAAATCGTAAATAGATGGC | 57 | 641 | [ |
K5 | K5-F,TGGTAGTGATGCTCGCGA; K5-R,CCTGAACCCACCCCAATC | 56 | 280 | [ |
K20 | K20-F,CGGTGCTACAGTGCATCATT; K20-R,GTTATACGATGCTCAGTCGC | 57 | 741 | [ |
K54 | K54-F,CATTAGCTCAGTGGTTTGGCT; K54-R,GCTTGACAAACACCATAGCAG | 58 | 881 | [ |
K57 | K57-F,CTCAGGGCTAGAAGTGTCAT; K57-R,CACTAACCCAGAAAGTCGAG | 60 | 1 037 | [ |
wabG | wabG-F,ATGAGTAAATTCAGGCTGGCTCTG; wabG-R,TTATTTCACCAGATCCTGATAAAGAGAAAG | 57 | 1 128 | [ |
mrkD | mrkD-F,ATGTCGCTGAGGAAATTACTAACGC; mrkD-R,TTAATCGTACGTCAGGTTAAAGATCAT | 57 | 996 | [ |
rmpA | rmpA-F,ACTGGGCTACCTCTGCTTCA; rmpA-R,CTTGCATGAGCCATCTTTCA | 55 | 516 | [ |
ureA | ureA-F,GCTGACTTAAGAGAACGTTATG; ureA-R,GATCATGGCGCTACCTCTA | 51 | 337 | [ |
fimH | fimH-F,GCTCTGGCCGATACTACCACGG; fimH-R,GCGAAATAACGTGCCTGGAACGG | 60 | 425 | [ |
菌株 Strain | 耐药谱 Drug resistance spectrum |
---|---|
LZ1 | AMC/FEP/AZT/SXT/CTR/OXA/STR |
LZ2 | AMP/KZ/TET/SXT/CTR/DOX/OXA/STR |
LZ3 | AMP/KZ/FEP/CN/TET/FFC/CTR/DOX/OXA/STR |
LZ4 | AMC/AMP/KZ |
YB1 | AMP/TET/SXT/DOX/OXA/STR |
YB2 | AMC/AMP/KZ/FEP/CTR/OXA/ENR/STR |
YB3 | TET/AZT/CTR/OXA/ENR/STR |
YB4 | AZT/SXT/OXA |
YB5 | AMC/AMP/KZ/CN/TET/FFC/SXT/CTR/DOX/OXA/STR |
YB6 | AMC/AMP/KZ/FEP/TET/FFC/SXT/DOX/OXA |
YB7 | AMC/AMP/TET/FFC/SXT/DOX/OXA/STR |
YB8 | OXA |
YB9 | AMC/AMP/KZ/TET/SXT/CTR/DOX/OXA |
YB10 | AMC/AMP/KZ/FEP/CN/TET/AZT/FFC/CIP/CTR/DOX/OXA/ENR/STR |
YB11 | AMC/AMP/KZ/FEP/CN/TET/FFC/SXT/CTR/DOX/OXA/STR |
YB12 | AMC/AMP/KZ/DOX/OXA/STR |
Table 3 Drug resistance of 16 strains of Klebsiella pneumonia
菌株 Strain | 耐药谱 Drug resistance spectrum |
---|---|
LZ1 | AMC/FEP/AZT/SXT/CTR/OXA/STR |
LZ2 | AMP/KZ/TET/SXT/CTR/DOX/OXA/STR |
LZ3 | AMP/KZ/FEP/CN/TET/FFC/CTR/DOX/OXA/STR |
LZ4 | AMC/AMP/KZ |
YB1 | AMP/TET/SXT/DOX/OXA/STR |
YB2 | AMC/AMP/KZ/FEP/CTR/OXA/ENR/STR |
YB3 | TET/AZT/CTR/OXA/ENR/STR |
YB4 | AZT/SXT/OXA |
YB5 | AMC/AMP/KZ/CN/TET/FFC/SXT/CTR/DOX/OXA/STR |
YB6 | AMC/AMP/KZ/FEP/TET/FFC/SXT/DOX/OXA |
YB7 | AMC/AMP/TET/FFC/SXT/DOX/OXA/STR |
YB8 | OXA |
YB9 | AMC/AMP/KZ/TET/SXT/CTR/DOX/OXA |
YB10 | AMC/AMP/KZ/FEP/CN/TET/AZT/FFC/CIP/CTR/DOX/OXA/ENR/STR |
YB11 | AMC/AMP/KZ/FEP/CN/TET/FFC/SXT/CTR/DOX/OXA/STR |
YB12 | AMC/AMP/KZ/DOX/OXA/STR |
Fig.4 PCR amplification results of TEM gene in 16 isolates M, DL2000 DNA marker; Lanes 1-3, 5-6, 8-10, 13-15, TEM gene positive samples; Lanes 4, 7, 11, 12, 16, Negative samples; 17, Negative control.
Fig.5 PCR amplification results of capsular serotype K5 gene in 16 isolates M, DL2000 DNA marker;Lanes 10, 13, 15, Capsular serotype K5 gene positive samples; Lanes 1-9, 11-12, 14, 16, Negative samples; 17, Negative control.
Fig.6 PCR amplification results of virulence gene mrkD in 16 isolates M, DL2000 DNA marker; Lanes 2-16,Positive samples of virulence gene mrkD; Lane 1,Negative sample; 17,Negative control.
菌株 Strain | 荚膜血清型 Capsular serotype | 毒力基因 Virulence gene | 小鼠死亡数量 Quantity of dead mice |
---|---|---|---|
LZ1 | K20 | fimH | 2 |
LZ2 | — | mrkD/wabG/ureA/fimH | 2 |
LZ3 | — | mrkD/wabG/ureA/fimH | 2 |
LZ4 | — | mrkD/wabG/ureA/fimH | 1 |
YB1 | — | mrkD/wabG/ureA/fimH | 1 |
YB2 | — | mrkD/wabG/ureA/fimH | 2 |
YB3 | — | mrkD/wabG/ureA/fimH | 2 |
YB4 | K5 | mrkD/wabG/ureA/fimH | 2 |
YB5 | — | mrkD/wabG/ureA/fimH | 2 |
YB6 | K5 | mrkD/wabG/fimH | 2 |
YB7 | — | mrkD/fimH | 2 |
YB8 | K1 | mrkD/wabG/ureA/fimH | 2 |
YB9 | — | mrkD/wabG/rmpA/fimH | 1 |
YB10 | K5 | mrkD/wabG/ureA/fimH | 2 |
YB11 | — | mrkD/wabG/ureA/fimH | 0 |
YB12 | — | mrkD/wabG/ureA/fimH | 1 |
Table 4 Pathogenicity of strains to mice
菌株 Strain | 荚膜血清型 Capsular serotype | 毒力基因 Virulence gene | 小鼠死亡数量 Quantity of dead mice |
---|---|---|---|
LZ1 | K20 | fimH | 2 |
LZ2 | — | mrkD/wabG/ureA/fimH | 2 |
LZ3 | — | mrkD/wabG/ureA/fimH | 2 |
LZ4 | — | mrkD/wabG/ureA/fimH | 1 |
YB1 | — | mrkD/wabG/ureA/fimH | 1 |
YB2 | — | mrkD/wabG/ureA/fimH | 2 |
YB3 | — | mrkD/wabG/ureA/fimH | 2 |
YB4 | K5 | mrkD/wabG/ureA/fimH | 2 |
YB5 | — | mrkD/wabG/ureA/fimH | 2 |
YB6 | K5 | mrkD/wabG/fimH | 2 |
YB7 | — | mrkD/fimH | 2 |
YB8 | K1 | mrkD/wabG/ureA/fimH | 2 |
YB9 | — | mrkD/wabG/rmpA/fimH | 1 |
YB10 | K5 | mrkD/wabG/ureA/fimH | 2 |
YB11 | — | mrkD/wabG/ureA/fimH | 0 |
YB12 | — | mrkD/wabG/ureA/fimH | 1 |
Fig.7 Whole dissection of mice A,No abnormalities in mice under control; B,Gallbladder enlargement, gas accumulation in the intestine, and swelling in mice with weakly virulent strain; C,Obvious gallbladder enlargement, gas accumulation in the intestine, and enlargement in mice with strongly virulent strain.
Fig.8 Morphology of organs in normal mice, as well as virulent mice A, No abnormalities in the lung of mice under control; A1, Congested and enlarged lung in the mice with weakly virulent strain; A2, Obviously congested and enlarged lung in the mice with strongly virulent strain. B, No abnormalities in the spleen of mice under control; B1, Congested and enlarged spleen in the mice with weakly virulent strain; B2, Obviously congested and enlarged spleen in the mice with strongly virulent strain. C, No abnormalities in the liver of mice under control; C1, Congested and enlarged liver in the mice with weakly virulent strain; C2, Obvious congested and enlarged liver in the mice with strongly virulent strain. D, No abnormalities in the kidney of mice under control; D1, Congestion and enlarged kidney in the mice with weakly virulent strain; D2, Obvious congested and enlarged kidney in the mice with strongly virulent strain.
Fig.9 Histopathological changes in virulent mice A, Liver congestion (100×);B, Hepatic nucleopyknosis, neutrophils (400×); C, Thickening of the splenic capsule (100×); D, Necrosis of splenocytes “Starry sky phenomenon” (400×); E, Slightly thickened alveolar diaphragm (100×); F, Lung neutrophils increased (400×); G, Glomerular enlargement, flocculent sedimentation (100×); H, Glomerulus enlargement(400×).
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