植物间水平基因转移——基因交流新途径及其农业利用潜力

doi:10.3969/j.issn.1004-1524.20230262

浙江农业学报 ›› 2024, Vol. 36 ›› Issue (2): 455-469.DOI: 10.3969/j.issn.1004-1524.20230262

植物间水平基因转移——基因交流新途径及其农业利用潜力

杨洋¹(), 袁璐¹, 刘彬¹, 王挺进¹, 张爱珺¹, 刘柯¹, 李旭青², 道丽筠², 袁鑫³, 陈利萍¹^,³^,^*()

1.浙江大学农业与生物技术学院园艺系,浙江杭州 310058
2.青海省乌兰县农牧和乡村振兴局,青海乌兰 817199
3.浙江大学山东(临沂)现代农业研究院,山东临沂 276000

收稿日期:2023-03-01 出版日期:2024-02-25 发布日期:2024-03-05
作者简介:杨洋(1998—),女,山东潍坊人,硕士研究生,研究方向为蔬菜种质资源与分子育种。E-mail:22016061@zju.edu.cn
通讯作者: *陈利萍,E-mail:chenliping@zju.edu.cn
基金资助:
国家重点研发计划(2019YFD1000300);浙江省重点研发计划(2021C04031);浙江省“三农九方”科技协作计划(2022SNJF027)

Research progress on horizontal gene transfer between plants: a new way of gene exchange and its agricultural utilization potential

YANG Yang¹(), YUAN Lu¹, LIU Bin¹, WANG Tingjin¹, ZHANG Aijun¹, LIU Ke¹, LI Xuqing², DAO Liyun², YUAN Xin³, CHEN Liping¹^,³^,^*()

1. Department of Horticulture, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
2. Bureau of Agriculture, Animal Husbandry and Rural Revitalization of Wulan of Qinghai Province, Wulan 817199, Qinghai, China
3. Shandong (Linyi) Institute of Modern Agriculture, Zhejiang University, Linyi 276000, Shandong, China

Received:2023-03-01 Online:2024-02-25 Published:2024-03-05

摘要/Abstract

摘要：

水平基因转移(horizontal gene transfer, HGT)指通过受精以外的方式进行的跨物种遗传物质传递,是原核和真核生物基因组构成的重要来源,对生物进化具有重要推动作用。近年来,基因组测序技术的发展进一步证明了植物之间存在着大量的水平基因转移事件。文章主要对国内外植物间水平基因转移的途径、转移的基因分类,以及水平基因转移在农业中的应用潜力等方面进行了综述和讨论,分析了当前植物水平基因转移研究存在的问题,并就未来基础理论研究及利用的方向作了展望。

关键词: 寄生植物, 嫁接, 水平基因转移, 线粒体, 叶绿体

Abstract:

Horizontal gene transfer (HGT), refers to the transfer of genetic material across species by means other than fertilization, is different from sexual reproduction inheritance. It is an important source of prokaryotic and eukaryotic genome composition and plays an important role in promoting biological evolution. In recent years, with the development of genome sequencing technology, it is further proved that there are a large number of HGT events among plants. This paper mainly reviewed the ways and classification of HGT between plants, as well as the application potential of HGT in agriculture, and put forward prospects for the problems in the current research, the future basic theoretical research and the direction of utilization.

Key words: parasitic plant, graft, horizontal gene transfer, mitochondrion, chloroplast

中图分类号:

杨洋, 袁璐, 刘彬, 王挺进, 张爱珺, 刘柯, 李旭青, 道丽筠, 袁鑫, 陈利萍. 植物间水平基因转移——基因交流新途径及其农业利用潜力[J]. 浙江农业学报, 2024, 36(2): 455-469.

YANG Yang, YUAN Lu, LIU Bin, WANG Tingjin, ZHANG Aijun, LIU Ke, LI Xuqing, DAO Liyun, YUAN Xin, CHEN Liping. Research progress on horizontal gene transfer between plants: a new way of gene exchange and its agricultural utilization potential[J]. Acta Agriculturae Zhejiangensis, 2024, 36(2): 455-469.

图/表 5

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供体 Donor plant	受体 Recipient plant	转移途径 Transfer route	基因 Gene	参考文献 References
单子叶植物Monocot	真双子叶植物Eudicots		rps2	[13]
毛茛目Ranunculales	忍冬科Caprifoliaceae	—	rps11	[13]
—	桦木科Betulaceae	—	rps11	[13]
单子叶植物Monocot	血根草Sanguinaria canadensis	—	rps11	[13]
真双子叶植物Eudicots	无油樟Amborella trichopoda	—	atp1	[13]
开花植物Flowering	买麻藤属Gnetum	—	nad1	[14]
菟丝子Cuscuta	车前属Plantago	寄生Parasitism	atp1, atp6, matR	[20-21]
唇形目Lamiales	菟丝子亚属Pachystigma	寄生Parasitism	atp1	[66]
豆科Fabaceae	大花草目 Rafflesiales	寄生Parasitism	atp1	[28]
	豆生花属 Pilostyles
葡萄科Vitaceae	大花草科Rafflesiacecae	寄生Parasitism	nad1B-C	[26]
崖爬藤属Tetrastigma
石竹目Caryophyllales	锁阳属 Cynomorium	寄生Parasitism	atp8, atp9, ccmB, cox2, cox3, nad1, rps3	[30]
无患子目Sapindales	锁阳属 Cynomorium	寄生Parasitism	atp1, atp8, rrn26, cox1	[30]
葫芦目Cucurbitales/	锁阳属 Cynomorium	—	atp6	[30]
菊目Asterales
石竹目Caryophyllales	锁阳属 Cynomorium	寄生Parasitism	atp1, atp8, ccmFn, cox2, cox1	[31]
无患子目Sapindales	锁阳属 Cynomorium	寄生Parasitism	atp1, atp8, cox2, cox1	[31]
豆科Fabaceae 含羞草亚科 Mimosoideae	裸花蛇菰 Lophophytum mirabile	寄生Parasitism	atp9, rpl10, atp1, atp4, atp6, atp8, ccmB, ccmC, ccmFC, ccmFN, cob, cox2, cox3, mttB, nad2x1x2, nad2x3x5, nad3, nad4L, nad5x4x5, nad6, rpl2, rpl5, rpl16, rps3, rps4, rps12, rps14, rps19, sdh4	[48-49,67]
旋花科Convolvulaceae	无根藤Cassytha filiformis	—	cox1	[59]
被子植物Angiosperm	加纳利松Pinus canariensis	—	nad5-1	[60]
龙胆目Gentianales	老鹳草属 Geranium	—	atp4	[61]
真双子叶植物Eudicots	老鹳草属 Geranium	—	atp8	[61]
茄目 Solanales	老鹳草属 Geranium	寄生Parasitism	ccmC, cob, cox2, mttB, nad2 exon4,5, rpl5, rps4, rps14	[61]
金虎尾目Malpighiales	老鹳草属 Geranium	—	ccmFc, cox1, rpl16, rps1, rps3, rps4, rps10	[61]
唇形目Lamiales	老鹳草属 Geranium	寄生Parasitism	nad6	[61]
硅藻 Diatom	绿胞藻 raphidophyte	—	cox1_g2_B	[63]
檀香目Santalales	蕨萁Botrychium virginianum	—	nad1B-C, matR	[64]
被子植物Angiosperm	北非雪松Cedrus atlantica	—	rps3, rpl16	[65]
蔷薇目Rosales	毛牵牛Ipomoea biflora	—	rps7	[73]
蔷薇类植物Rosids	旋花科Convolvulaceae	—	ccmFc	[73]

供体 Donor plant	受体 Recipient plant	转移途径 Transfer route	基因 Gene	参考文献 References
单子叶植物Monocot	真双子叶植物Eudicots		rps2	[13]
毛茛目Ranunculales	忍冬科Caprifoliaceae	—	rps11	[13]
—	桦木科Betulaceae	—	rps11	[13]
单子叶植物Monocot	血根草Sanguinaria canadensis	—	rps11	[13]
真双子叶植物Eudicots	无油樟Amborella trichopoda	—	atp1	[13]
开花植物Flowering	买麻藤属Gnetum	—	nad1	[14]
菟丝子Cuscuta	车前属Plantago	寄生Parasitism	atp1, atp6, matR	[20-21]
唇形目Lamiales	菟丝子亚属Pachystigma	寄生Parasitism	atp1	[66]
豆科Fabaceae	大花草目 Rafflesiales	寄生Parasitism	atp1	[28]
	豆生花属 Pilostyles
葡萄科Vitaceae	大花草科Rafflesiacecae	寄生Parasitism	nad1B-C	[26]
崖爬藤属Tetrastigma
石竹目Caryophyllales	锁阳属 Cynomorium	寄生Parasitism	atp8, atp9, ccmB, cox2, cox3, nad1, rps3	[30]
无患子目Sapindales	锁阳属 Cynomorium	寄生Parasitism	atp1, atp8, rrn26, cox1	[30]
葫芦目Cucurbitales/	锁阳属 Cynomorium	—	atp6	[30]
菊目Asterales
石竹目Caryophyllales	锁阳属 Cynomorium	寄生Parasitism	atp1, atp8, ccmFn, cox2, cox1	[31]
无患子目Sapindales	锁阳属 Cynomorium	寄生Parasitism	atp1, atp8, cox2, cox1	[31]
豆科Fabaceae 含羞草亚科 Mimosoideae	裸花蛇菰 Lophophytum mirabile	寄生Parasitism	atp9, rpl10, atp1, atp4, atp6, atp8, ccmB, ccmC, ccmFC, ccmFN, cob, cox2, cox3, mttB, nad2x1x2, nad2x3x5, nad3, nad4L, nad5x4x5, nad6, rpl2, rpl5, rpl16, rps3, rps4, rps12, rps14, rps19, sdh4	[48-49,67]
旋花科Convolvulaceae	无根藤Cassytha filiformis	—	cox1	[59]
被子植物Angiosperm	加纳利松Pinus canariensis	—	nad5-1	[60]
龙胆目Gentianales	老鹳草属 Geranium	—	atp4	[61]
真双子叶植物Eudicots	老鹳草属 Geranium	—	atp8	[61]
茄目 Solanales	老鹳草属 Geranium	寄生Parasitism	ccmC, cob, cox2, mttB, nad2 exon4,5, rpl5, rps4, rps14	[61]
金虎尾目Malpighiales	老鹳草属 Geranium	—	ccmFc, cox1, rpl16, rps1, rps3, rps4, rps10	[61]
唇形目Lamiales	老鹳草属 Geranium	寄生Parasitism	nad6	[61]
硅藻 Diatom	绿胞藻 raphidophyte	—	cox1_g2_B	[63]
檀香目Santalales	蕨萁Botrychium virginianum	—	nad1B-C, matR	[64]
被子植物Angiosperm	北非雪松Cedrus atlantica	—	rps3, rpl16	[65]
蔷薇目Rosales	毛牵牛Ipomoea biflora	—	rps7	[73]
蔷薇类植物Rosids	旋花科Convolvulaceae	—	ccmFc	[73]

供体 Donor plant	受体 Recipient plant	转移途径 Transfer route	基因 Gene	参考文献 References
列当属 Orobanche	小苞列当属 Phelipanche	—	rps2, trnL-F, rbcL	[79]
梭梭 Haloxylon ammodendron	肉苁蓉 Cistanche deserticola	寄生Parasitism	rpoC2	[29]
被子植物Angiosperm	野菰 Aeginetia indica	—	atpH	[80]
拟三列真藓 Bryum pseudotriquetrum	大叶镰刀藓 Scorpidium cossonii	—	rpl16	[83]

供体 Donor plant	受体 Recipient plant	转移途径 Transfer route	基因 Gene	参考文献 References
列当属 Orobanche	小苞列当属 Phelipanche	—	rps2, trnL-F, rbcL	[79]
梭梭 Haloxylon ammodendron	肉苁蓉 Cistanche deserticola	寄生Parasitism	rpoC2	[29]
被子植物Angiosperm	野菰 Aeginetia indica	—	atpH	[80]
拟三列真藓 Bryum pseudotriquetrum	大叶镰刀藓 Scorpidium cossonii	—	rpl16	[83]

供体 Donor plant	受体 Recipient plant	转移途径 Transfer route	基因 Gene	参考文献 References
十字花科Brassicaceous	分枝列当Orobanche aegyptiaca	寄生Parasitism	SSL	[22]
十字花科Brassicaceous	南方菟丝子Cuscuta australis	寄生Parasitism	SSL	[22]
蜀黍族 Andropogoneae	毛颖草Alloteropsis semialata (采自澳大利亚Taken from Australia)	错位授粉(推测) Misaligned pollination (speculated)	ppc	[39,87 -88]
棕叶狗尾草 Setaria palmifolia	毛颖草Alloteropsis semialata (采自南非Taken from South Africa)	错位授粉(推测) Misaligned pollination (speculated)	ppc	[39,87 -88]
糖蜜草亚族 Melinidinae	毛颖草属 Alloteropsis 多种植物Multiple plants	错位授粉(推测) Misaligned pollination (speculated)	ppc	[39,87 -88]
蒺藜草亚族 Cenchrinae	毛颖草属 Alloteropsis	错位授粉(推测) Misaligned pollination (speculated)	pck	[39,88]
早熟禾属 Poa	羊茅 Festuca ovina	错位授粉(推测) Misaligned pollination (speculated)	PgiC	[90]
高粱Sorghum	黄独脚金Striga hermonthica	寄生Parasitism	ShContig9483	[43]
角苔Anthoceros punctatus	蕨类Fern	—	Neochrome	[86]
双子叶植物Dicotyledon	欧洲猪牙花Erythronium dens-canis	—	ITS	[96]
黍亚科Panicoideae	小麦族 Triticeae	—	BCGs	[92]
豆科Fabaceae	裸花蛇菰Lophophytum mirabile	寄生Parasitism	sdh3	[68]
蓝藻Blue-green algae	微小原甲藻Prorocentrum minimum	—	PmCuZnSOD	[95]

植物间水平基因转移——基因交流新途径及其农业利用潜力

Research progress on horizontal gene transfer between plants: a new way of gene exchange and its agricultural utilization potential

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