Acta Agriculturae Zhejiangensis ›› 2023, Vol. 35 ›› Issue (2): 308-318.DOI: 3969/j.issn.1004-1524.2023.02.08
• Horticultural Science • Previous Articles Next Articles
LI Pingfang1,2(
), YAO Xiefeng2,*(
), XU Jinhua2, ZHU Lingli2, YANG Xingping2,*(
)
Received:2022-05-20
Online:2023-02-25
Published:2023-03-14
Contact:
YAO Xiefeng,YANG Xingping
CLC Number:
LI Pingfang, YAO Xiefeng, XU Jinhua, ZHU Lingli, YANG Xingping. Identification and preliminary functional characterization of SWEET sugar transporters involved in fruit development of melon (Cucumis melo L.)[J]. Acta Agriculturae Zhejiangensis, 2023, 35(2): 308-318.
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URL: http://www.zjnyxb.cn/EN/3969/j.issn.1004-1524.2023.02.08
| 引物名称 | 上游引物序列 | 下游引物序列 |
|---|---|---|
| Primer name | Forward primer sequence(5'-3') | Reverse primer sequence(5'-3') |
| CmSWEET1 | TCTTGGAAATGCAACTGCTC | GGCAATTCAACATCGTCATC |
| CmSWEET2 | AAAGTGTGGAGTTTATGCCATTT | CCCAACATAGTTCCTATTCCATT |
| CmSWEET3 | CTCCGCAAGTTCCTTATGGT | CAATGGGCTTCCCACTAGAT |
| CmSWEET5d | GGCCTCTTTCTGTCACCAGT | GCATTCCATAGAACACCCAA |
| CmSWEET7a | GAGGGAAGGTAAAGGGAAGG | TGTTGCGAGTCCTATCAAGC |
| CmSWEET7c | ATGGAAGAAGGGATCAGTGG | CCGTACAATGTCCACACCAT |
| CmSWEET10 | TTCTTCAGCCAAACATGGAC | CGGGTGCAATAGATCAGATG |
| CmSWEET12a | ACGCGGATGAGTTCTTTCTT | GAGCCTTCTTGGGAGCATAG |
| CmSWEET12c | TCGATACTCATCACCCTGGA | AAGTGCCACCACATATGGAA |
| CmSWEET12d | TCGAAAGAGAGTTTCTTCCTTACA | GCAGCAGGGTTATGGGTATT |
| CmSWEET15 | CTCCTTTGGTTGTGTCATCG | AATGAAGTGAATGGCCACAA |
| CmSWEET17c | AACGGAGATGATGGAGGAAG | TTGGCTTTGGAAGGCTTAAC |
| Actin7 | TGCCCAGAAGTTCTATTCCAGC | CATAGTTGAACCACCACTGAGGAC |
| TOPO-SWEET7a | CAC CAT GGT TTC TTT GGT GC | TCAAGCTCCATGGACCTCAG |
| TOPO-SWEET3 | CACCATGAGATCTCTCTACACCAT | CTAGGAGTTATTTTGATGTGGA |
| TOPO-SWEET17c | CACCATGGCTGCTAGTTTGAGCT | TCAAAATTTTCCATCTTCCACC |
| NEV-SWEET7a: | GCGGCCGC AAGCTTGTAAAAGAA AT GGT TTC TTT GGT GC | GCGGCCGCTCAAGCTCCATGGACCTC |
| NEV-SWEET3: | GCGGCCGC AAGCTTGTAAAAGAA ATGAGATCTCTCTACACC | GCGGCCGCCTAGGAGTTATTTTGATG |
Table 1 Primers used in RT-PCR, qPCR and cloning
| 引物名称 | 上游引物序列 | 下游引物序列 |
|---|---|---|
| Primer name | Forward primer sequence(5'-3') | Reverse primer sequence(5'-3') |
| CmSWEET1 | TCTTGGAAATGCAACTGCTC | GGCAATTCAACATCGTCATC |
| CmSWEET2 | AAAGTGTGGAGTTTATGCCATTT | CCCAACATAGTTCCTATTCCATT |
| CmSWEET3 | CTCCGCAAGTTCCTTATGGT | CAATGGGCTTCCCACTAGAT |
| CmSWEET5d | GGCCTCTTTCTGTCACCAGT | GCATTCCATAGAACACCCAA |
| CmSWEET7a | GAGGGAAGGTAAAGGGAAGG | TGTTGCGAGTCCTATCAAGC |
| CmSWEET7c | ATGGAAGAAGGGATCAGTGG | CCGTACAATGTCCACACCAT |
| CmSWEET10 | TTCTTCAGCCAAACATGGAC | CGGGTGCAATAGATCAGATG |
| CmSWEET12a | ACGCGGATGAGTTCTTTCTT | GAGCCTTCTTGGGAGCATAG |
| CmSWEET12c | TCGATACTCATCACCCTGGA | AAGTGCCACCACATATGGAA |
| CmSWEET12d | TCGAAAGAGAGTTTCTTCCTTACA | GCAGCAGGGTTATGGGTATT |
| CmSWEET15 | CTCCTTTGGTTGTGTCATCG | AATGAAGTGAATGGCCACAA |
| CmSWEET17c | AACGGAGATGATGGAGGAAG | TTGGCTTTGGAAGGCTTAAC |
| Actin7 | TGCCCAGAAGTTCTATTCCAGC | CATAGTTGAACCACCACTGAGGAC |
| TOPO-SWEET7a | CAC CAT GGT TTC TTT GGT GC | TCAAGCTCCATGGACCTCAG |
| TOPO-SWEET3 | CACCATGAGATCTCTCTACACCAT | CTAGGAGTTATTTTGATGTGGA |
| TOPO-SWEET17c | CACCATGGCTGCTAGTTTGAGCT | TCAAAATTTTCCATCTTCCACC |
| NEV-SWEET7a: | GCGGCCGC AAGCTTGTAAAAGAA AT GGT TTC TTT GGT GC | GCGGCCGCTCAAGCTCCATGGACCTC |
| NEV-SWEET3: | GCGGCCGC AAGCTTGTAAAAGAA ATGAGATCTCTCTACACC | GCGGCCGCCTAGGAGTTATTTTGATG |
| 基因名 Gene name | 甜瓜基因组ID Melon genome IDs | 拟南芥同源基因 Arabidopsis hits | E值 E-value | 开放阅读框 ORF length/bp | 多肽Deduced polypeptide | |||
|---|---|---|---|---|---|---|---|---|
| 长度 | 分子量 | 等电点 | 跨膜区域 | |||||
| Length/aa | MW/ku | pI | TM | |||||
| CmSWEET1 | MELO3C008417.2.1 | AtSWEET1 | 6.00×10-94 | 759 | 252 | 27.7 | 9.25 | 7 |
| CmSWEET3 | MELO3C005869.2.1 | AtSWEET3 | 3.00×10-43 | 627 | 208 | 23.5 | 9.06 | 5 |
| CmSWEET5a | MELO3C002256.2.1 | AtSWEET5 | 2.00×10-72 | 552 | 183 | 21 | 9.42 | 5 |
| CmSWEET5b | MELO3C009951.2.1 | AtSWEET5 | 9.00×10-67 | 747 | 248 | 28.2 | 8.91 | 7 |
| CmSWEET5c | MELO3C009950.2.1 | AtSWEET5 | 5.00×10-63 | 705 | 234 | 26 | 8.72 | 7 |
| CmSWEET7a | MELO3C016259.2.1 | AtSWEET7 | 3.00×10-74 | 789 | 262 | 29.1 | 9.1 | 7 |
| CmSWEET7b | MELO3C005758.2.1 | AtSWEET7 | 3.00×10-39 | 504 | 265 | 29.1 | 9.66 | 7 |
| CmSWEET9a | MELO3C008674.2.1 | AtSWEET9 | 4.00×10-76 | 798 | 262 | 30.1 | 9.07 | 7 |
| CmSWEET9b | MELO3C031232.2.1 | AtSWEET9 | 4.00×10-59 | 639 | 212 | 24.3 | 9.8 | 6 |
| CmSWEET10 | MELO3C026184.2.1 | AtSWEET10 | 5.00×10-82 | 891 | 296 | 33 | 9.23 | 7 |
| CmSWEET12a | MELO3C026183.2.1 | AtSWEET12 | 1.00×10-79 | 894 | 297 | 33.3 | 8.85 | 7 |
| CmSWEET12b | MELO3C002381.2.1 | AtSWEET12 | 2.00×10-72 | 876 | 291 | 32.9 | 6.44 | 7 |
| CmSWEET12c | MELO3C002380.2.1 | AtSWEET12 | 3.00×10-38 | 729 | 242 | 27.4 | 8.97 | 5 |
| CmSWEET15 | MELO3C022341.2.1 | AtSWEET15 | 2.00×10-74 | 822 | 273 | 30.9 | 9.19 | 6 |
| CmSWEET17a | MELO3C000200.2.1 | AtSWEET17 | 2.00×10-42 | 582 | 193 | 21.6 | 7.66 | 4 |
| CmSWEET17b | MELO3C004222.2.1 | AtSWEET17 | 1.00×10-31 | 456 | 151 | 16.6 | 8.67 | 5 |
| CmSWEET17c | MELO3C027076.2.1 | AtSWEET17 | 2.00×10-27 | 615 | 204 | 22.5 | 7.8 | 4 |
| CmSWEET17d | MELO3C031734.2.1 | AtSWEET17 | 4.00×10-16 | 501 | 166 | 19.5 | 9.86 | 2 |
Table 2 Bioinformatics analysis of SWEETs family genes in melon
| 基因名 Gene name | 甜瓜基因组ID Melon genome IDs | 拟南芥同源基因 Arabidopsis hits | E值 E-value | 开放阅读框 ORF length/bp | 多肽Deduced polypeptide | |||
|---|---|---|---|---|---|---|---|---|
| 长度 | 分子量 | 等电点 | 跨膜区域 | |||||
| Length/aa | MW/ku | pI | TM | |||||
| CmSWEET1 | MELO3C008417.2.1 | AtSWEET1 | 6.00×10-94 | 759 | 252 | 27.7 | 9.25 | 7 |
| CmSWEET3 | MELO3C005869.2.1 | AtSWEET3 | 3.00×10-43 | 627 | 208 | 23.5 | 9.06 | 5 |
| CmSWEET5a | MELO3C002256.2.1 | AtSWEET5 | 2.00×10-72 | 552 | 183 | 21 | 9.42 | 5 |
| CmSWEET5b | MELO3C009951.2.1 | AtSWEET5 | 9.00×10-67 | 747 | 248 | 28.2 | 8.91 | 7 |
| CmSWEET5c | MELO3C009950.2.1 | AtSWEET5 | 5.00×10-63 | 705 | 234 | 26 | 8.72 | 7 |
| CmSWEET7a | MELO3C016259.2.1 | AtSWEET7 | 3.00×10-74 | 789 | 262 | 29.1 | 9.1 | 7 |
| CmSWEET7b | MELO3C005758.2.1 | AtSWEET7 | 3.00×10-39 | 504 | 265 | 29.1 | 9.66 | 7 |
| CmSWEET9a | MELO3C008674.2.1 | AtSWEET9 | 4.00×10-76 | 798 | 262 | 30.1 | 9.07 | 7 |
| CmSWEET9b | MELO3C031232.2.1 | AtSWEET9 | 4.00×10-59 | 639 | 212 | 24.3 | 9.8 | 6 |
| CmSWEET10 | MELO3C026184.2.1 | AtSWEET10 | 5.00×10-82 | 891 | 296 | 33 | 9.23 | 7 |
| CmSWEET12a | MELO3C026183.2.1 | AtSWEET12 | 1.00×10-79 | 894 | 297 | 33.3 | 8.85 | 7 |
| CmSWEET12b | MELO3C002381.2.1 | AtSWEET12 | 2.00×10-72 | 876 | 291 | 32.9 | 6.44 | 7 |
| CmSWEET12c | MELO3C002380.2.1 | AtSWEET12 | 3.00×10-38 | 729 | 242 | 27.4 | 8.97 | 5 |
| CmSWEET15 | MELO3C022341.2.1 | AtSWEET15 | 2.00×10-74 | 822 | 273 | 30.9 | 9.19 | 6 |
| CmSWEET17a | MELO3C000200.2.1 | AtSWEET17 | 2.00×10-42 | 582 | 193 | 21.6 | 7.66 | 4 |
| CmSWEET17b | MELO3C004222.2.1 | AtSWEET17 | 1.00×10-31 | 456 | 151 | 16.6 | 8.67 | 5 |
| CmSWEET17c | MELO3C027076.2.1 | AtSWEET17 | 2.00×10-27 | 615 | 204 | 22.5 | 7.8 | 4 |
| CmSWEET17d | MELO3C031734.2.1 | AtSWEET17 | 4.00×10-16 | 501 | 166 | 19.5 | 9.86 | 2 |
Fig.4 qPCR analysis of 3 CmSWEETs genes during different fruit developmental stages in melon plants Each fruit was set as one replicate, the data were obtained from three separate replicates, each value in the graph showed means ± SD. Expression levels produced by qPCR were expressed as a ratio to the control. which was set at 1.0.
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