Variations of cotton rhizosphere microbial community in different growth stages

doi:10.3969/j.issn.1004-1524.2019.08.18

›› 2019, Vol. 31 ›› Issue (8): 1361-1371.DOI: 10.3969/j.issn.1004-1524.2019.08.18

• Environmental Science • Previous Articles Next Articles

Variations of cotton rhizosphere microbial community in different growth stages

LIU Shanshan¹, WEI Xin¹, SHENG Furui¹, QIAO Qinghua^1,2,*

1. College of Biology and Pharmacy, Yulin Normal University, Yulin 537000, China;
2. Key Laboratory of Cotton Breeding and Cultivation in Huang-Huai-Hai Plain, Ministry of Agriculture and Rural Affairs, Cotton Research Center, Shandong Academy of Agricultural Sciences, Jinan 250100, China

Received:2019-03-27 Online:2019-08-25 Published:2019-08-30

Abstract

Abstract: To understand the cotton rhizosphere bacterial and fungal community structure during different growth stages, 16S and ITS regions of soil DNAs sampled from the rhizosphere and corresponding control soil of upland and island cotton were sequenced and analyzed. The results indicated that species richness of bacteria and fungi in rhizosphere of different growth stages were significantly (P<0.05) lower than that of control soil, and the species richness in rhizosphere were the highest in the budding stage. Evolutionary distance between the microbiome leading to the difference between seedling stage and budding stage was farther than that between budding stage and flowering stage. Cluster analysis showed that dominate phyla of cotton rhizosphere bacterial community were Proteobacteria, Acidobacteria, Firmicutes, Cyanobacteria, Actinobacteria, Planctomycetes, Bacteroidetes and Verrucomicrobia, and dominate phyla of cotton rhizosphere fungal community were Ascomycota, Basidiomycota and Zygomycota. Moreover, the cotton rhizosphere bacterial and fungal genus with higher or lower relative abundance compared with control soil varied in different growth stages, and the quantity of genus with significantly (P<0.05) higher relative abundance was the highest in budding stage.

Key words: cotton, growth stage, rhizosphere, bacteria, fungi

CLC Number:

S154
S562

LIU Shanshan, WEI Xin, SHENG Furui, QIAO Qinghua. Variations of cotton rhizosphere microbial community in different growth stages[J]. , 2019, 31(8): 1361-1371.

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Variations of cotton rhizosphere microbial community in different growth stages

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