Acta Agriculturae Zhejiangensis ›› 2024, Vol. 36 ›› Issue (7): 1591-1601.DOI: 10.3969/j.issn.1004-1524.20231037
• Horticultural Science • Previous Articles Next Articles
ZHU Yanyu1(), YU Wentao2,*(
), GAO Shuilian3, LYU Shuiyuan2, WANG Pan1, JIN Wanmin3, GUI Wenjing1, LIN Yi1, YE Naixing1,*(
)
Received:
2023-08-31
Online:
2024-07-25
Published:
2024-08-05
CLC Number:
ZHU Yanyu, YU Wentao, GAO Shuilian, LYU Shuiyuan, WANG Pan, JIN Wanmin, GUI Wenjing, LIN Yi, YE Naixing. The diversity of tea germplasm resources and genetic relationship of ‘Tieguanyin’-derived varieties in Anxi, Fujian, China[J]. Acta Agriculturae Zhejiangensis, 2024, 36(7): 1591-1601.
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URL: http://www.zjnyxb.cn/EN/10.3969/j.issn.1004-1524.20231037
位点 Locus | 信息指数 Information index | 观测杂合度 Observed heterozygosity | 期望杂合度 Expected heterozygosity | 固定指数 Fixation index | 位点 Locus | 信息指数 Information index | 观测杂合度 Observed heterozygosity | 期望杂合度 Expected heterozygosity | 固定指数 Fixation index |
---|---|---|---|---|---|---|---|---|---|
cs1 cs115 cs13 cs15 cs167 cs3 cs5 cs84 cs10 cs130 cs170 cs202 cs218 cs30 cs51 cs104 cs131 cs207 cs219 cs31 cs44 cs88 cs105 cs118 cs132 cs157 cs180 | 0.663 0.396 0.263 0.387 0.557 0.385 0.451 0.514 0.644 0.640 0.580 0.612 0.161 0.300 0.608 0.468 0.431 0.556 0.282 0.547 0.526 0.544 0.294 0.422 0.197 0.294 0.370 | 0.595 0.235 0.203 0.246 0.460 0.250 0.313 0.296 0.732 0.491 0.440 0.547 0.088 0.107 0.489 0.289 0.211 0.397 0.133 0.415 0.425 0.427 0.283 0.315 0.140 0.283 0.199 | 0.470 0.253 0.163 0.256 0.384 0.251 0.302 0.360 0.452 0.448 0.407 0.426 0.089 0.193 0.418 0.318 0.266 0.374 0.175 0.337 0.348 0.389 0.191 0.279 0.116 0.191 0.247 | -0.268 0.011 -0.212 0.021 -0.168 0.030 -0.041 0.206 -0.603 -0.096 -0.074 -0.265 -0.010 0.359 -0.159 0.102 0.185 -0.052 0.067 -0.067 -0.200 -0.097 -0.365 -0.149 -0.141 -0.365 0.197 | cs208 cs32 cs45 cs54 cs9 cs134 cs16 cs23 cs33 cs55 cs76 cs112 cs163 cs36 cs198 cs213 cs39 cs48 cs66 cs124 cs146 cs20 cs215 cs4 cs81 cs95 | 0.251 0.386 0.558 0.555 0.554 0.640 0.354 0.420 0.546 0.502 0.324 0.414 0.293 0.572 0.151 0.400 0.497 0.225 0.573 0.202 0.324 0.245 0.388 0.487 0.271 0.294 | 0.123 0.228 0.424 0.388 0.513 0.802 0.230 0.277 0.433 0.510 0.230 0.289 0.207 0.439 0.062 0.216 0.316 0.179 0.370 0.148 0.276 0.236 0.212 0.454 0.191 0.283 | 0.139 0.250 0.379 0.376 0.381 0.451 0.241 0.264 0.373 0.337 0.194 0.269 0.188 0.388 0.083 0.246 0.324 0.141 0.387 0.120 0.203 0.149 0.243 0.321 0.159 0.191 | 0.163 -0.005 -0.110 -0.059 -0.288 -0.724 0.041 -0.050 -0.152 -0.388 -0.171 -0.077 -0.056 -0.113 0.109 0.156 0.089 -0.189 0.010 -0.152 -0.242 -0.246 0.058 -0.327 -0.146 -0.365 |
Table 1 Allele information of 53 polymorphic SNP loci
位点 Locus | 信息指数 Information index | 观测杂合度 Observed heterozygosity | 期望杂合度 Expected heterozygosity | 固定指数 Fixation index | 位点 Locus | 信息指数 Information index | 观测杂合度 Observed heterozygosity | 期望杂合度 Expected heterozygosity | 固定指数 Fixation index |
---|---|---|---|---|---|---|---|---|---|
cs1 cs115 cs13 cs15 cs167 cs3 cs5 cs84 cs10 cs130 cs170 cs202 cs218 cs30 cs51 cs104 cs131 cs207 cs219 cs31 cs44 cs88 cs105 cs118 cs132 cs157 cs180 | 0.663 0.396 0.263 0.387 0.557 0.385 0.451 0.514 0.644 0.640 0.580 0.612 0.161 0.300 0.608 0.468 0.431 0.556 0.282 0.547 0.526 0.544 0.294 0.422 0.197 0.294 0.370 | 0.595 0.235 0.203 0.246 0.460 0.250 0.313 0.296 0.732 0.491 0.440 0.547 0.088 0.107 0.489 0.289 0.211 0.397 0.133 0.415 0.425 0.427 0.283 0.315 0.140 0.283 0.199 | 0.470 0.253 0.163 0.256 0.384 0.251 0.302 0.360 0.452 0.448 0.407 0.426 0.089 0.193 0.418 0.318 0.266 0.374 0.175 0.337 0.348 0.389 0.191 0.279 0.116 0.191 0.247 | -0.268 0.011 -0.212 0.021 -0.168 0.030 -0.041 0.206 -0.603 -0.096 -0.074 -0.265 -0.010 0.359 -0.159 0.102 0.185 -0.052 0.067 -0.067 -0.200 -0.097 -0.365 -0.149 -0.141 -0.365 0.197 | cs208 cs32 cs45 cs54 cs9 cs134 cs16 cs23 cs33 cs55 cs76 cs112 cs163 cs36 cs198 cs213 cs39 cs48 cs66 cs124 cs146 cs20 cs215 cs4 cs81 cs95 | 0.251 0.386 0.558 0.555 0.554 0.640 0.354 0.420 0.546 0.502 0.324 0.414 0.293 0.572 0.151 0.400 0.497 0.225 0.573 0.202 0.324 0.245 0.388 0.487 0.271 0.294 | 0.123 0.228 0.424 0.388 0.513 0.802 0.230 0.277 0.433 0.510 0.230 0.289 0.207 0.439 0.062 0.216 0.316 0.179 0.370 0.148 0.276 0.236 0.212 0.454 0.191 0.283 | 0.139 0.250 0.379 0.376 0.381 0.451 0.241 0.264 0.373 0.337 0.194 0.269 0.188 0.388 0.083 0.246 0.324 0.141 0.387 0.120 0.203 0.149 0.243 0.321 0.159 0.191 | 0.163 -0.005 -0.110 -0.059 -0.288 -0.724 0.041 -0.050 -0.152 -0.388 -0.171 -0.077 -0.056 -0.113 0.109 0.156 0.089 -0.189 0.010 -0.152 -0.242 -0.246 0.058 -0.327 -0.146 -0.365 |
主坐标 Principal coordinate | 贡献率 Contribution rate | 累计贡献率 Cumulative contribution rate |
---|---|---|
第1主坐标 The first principal coordinate | 41.37 | 41.37 |
第2主坐标 The second principal coordinate | 9.92 | 51.29 |
第3主坐标 The third principal coordinate | 6.17 | 57.46 |
Table 2 Contribution rate of principal coordinate of 76 Anxi tea plant germplasm samples %
主坐标 Principal coordinate | 贡献率 Contribution rate | 累计贡献率 Cumulative contribution rate |
---|---|---|
第1主坐标 The first principal coordinate | 41.37 | 41.37 |
第2主坐标 The second principal coordinate | 9.92 | 51.29 |
第3主坐标 The third principal coordinate | 6.17 | 57.46 |
地区 Area | 西坪 Xiping | 虎邱 Huqiu | 湖上 Hushang | 福田 Futian |
---|---|---|---|---|
虎邱Huqiu | 0.081 | |||
湖上Hushang | 0.072 | 0.068 | ||
福田Futian | 0.269 | 0.101 | 0.231 | |
其他Other | 0.047 | 0.039 | 0.032 | 0.170 |
Table 3 Genetic distance between tea populations in township producing areas of Anxi County, China
地区 Area | 西坪 Xiping | 虎邱 Huqiu | 湖上 Hushang | 福田 Futian |
---|---|---|---|---|
虎邱Huqiu | 0.081 | |||
湖上Hushang | 0.072 | 0.068 | ||
福田Futian | 0.269 | 0.101 | 0.231 | |
其他Other | 0.047 | 0.039 | 0.032 | 0.170 |
品种 Variety | 铁观音 Tieguan- yin | 黄观音 Huang- guanyin | 金观音 Jinguan- yin | 紫玫瑰 Zimeigui | 金牡丹 Jinmu- dan | 春桃香 Chuntaoxiang | 新选205 Xinxuan 205 | 新选206 Xinxuan 206 | 新选209 Xinxuan 209 | 新选211 Xinxuan 211 | 新选212 Xinxuan 212 | 金玫瑰 Jinmei- gui | 紫牡丹 Zimudan | 春兰 Chunlan | 凤圆春 Fengyuan- chun | 金茗早 Jinming- zao |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
黄观音 | 0.545 | |||||||||||||||
Huangguanyin | ||||||||||||||||
金观音 | 0.600 | 0.527 | ||||||||||||||
Jinguanyin | ||||||||||||||||
紫玫瑰 | 0.655 | 0.509 | 0.618 | |||||||||||||
Zimeigui | ||||||||||||||||
金牡丹 | 0.655 | 0.491 | 0.655 | 0.782 | ||||||||||||
Jinmudan | ||||||||||||||||
春桃香 | 0.509 | 0.436 | 0.582 | 0.509 | 0.545 | |||||||||||
Chuntaoxiang | ||||||||||||||||
新选205 | 0.618 | 0.491 | 0.800 | 0.636 | 0.727 | 0.564 | ||||||||||
Xinxuan 205 | ||||||||||||||||
新选206 | 0.600 | 0.473 | 0.782 | 0.636 | 0.764 | 0.600 | 0.709 | |||||||||
Xinxuan 206 | ||||||||||||||||
新选209 | 0.600 | 0.473 | 0.655 | 0.745 | 0.673 | 0.545 | 0.600 | 0.709 | ||||||||
Xinxuan 209 | ||||||||||||||||
新选211 | 0.691 | 0.491 | 0.618 | 0.782 | 0.655 | 0.509 | 0.582 | 0.709 | 0.782 | |||||||
Xinxuan 211 | ||||||||||||||||
新选212 | 0.636 | 0.491 | 0.691 | 0.673 | 0.655 | 0.545 | 0.673 | 0.691 | 0.709 | 0.709 | ||||||
Xinxuan 212 | ||||||||||||||||
金玫瑰 | 0.491 | 0.400 | 0.582 | 0.673 | 0.600 | 0.636 | 0.655 | 0.618 | 0.655 | 0.618 | 0.564 | |||||
Jinmeigui | ||||||||||||||||
紫牡丹 | 0.509 | 0.673 | 0.509 | 0.545 | 0.655 | 0.491 | 0.491 | 0.509 | 0.509 | 0.509 | 0.455 | 0.455 | ||||
Zimudan | ||||||||||||||||
春兰 | 0.509 | 0.491 | 0.473 | 0.382 | 0.345 | 0.436 | 0.418 | 0.509 | 0.564 | 0.455 | 0.455 | 0.382 | 0.364 | |||
Chunlan | ||||||||||||||||
凤圆春 | 0.527 | 0.400 | 0.473 | 0.400 | 0.473 | 0.418 | 0.582 | 0.527 | 0.582 | 0.527 | 0.491 | 0.473 | 0.455 | 0.436 | ||
Fengyuanchun | ||||||||||||||||
金茗早 | 0.400 | 0.418 | 0.491 | 0.455 | 0.473 | 0.527 | 0.418 | 0.527 | 0.418 | 0.418 | 0.491 | 0.455 | 0.418 | 0.436 | 0.345 | |
Jinmingzao | ||||||||||||||||
黄玫瑰 | 0.509 | 0.636 | 0.636 | 0.600 | 0.564 | 0.436 | 0.582 | 0.527 | 0.600 | 0.618 | 0.564 | 0.491 | 0.673 | 0.418 | 0.582 | 0.455 |
Huangmeigui |
Table 4 Genetic similarity coefficients of ‘Tieguanyin’ and its derived varieties
品种 Variety | 铁观音 Tieguan- yin | 黄观音 Huang- guanyin | 金观音 Jinguan- yin | 紫玫瑰 Zimeigui | 金牡丹 Jinmu- dan | 春桃香 Chuntaoxiang | 新选205 Xinxuan 205 | 新选206 Xinxuan 206 | 新选209 Xinxuan 209 | 新选211 Xinxuan 211 | 新选212 Xinxuan 212 | 金玫瑰 Jinmei- gui | 紫牡丹 Zimudan | 春兰 Chunlan | 凤圆春 Fengyuan- chun | 金茗早 Jinming- zao |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
黄观音 | 0.545 | |||||||||||||||
Huangguanyin | ||||||||||||||||
金观音 | 0.600 | 0.527 | ||||||||||||||
Jinguanyin | ||||||||||||||||
紫玫瑰 | 0.655 | 0.509 | 0.618 | |||||||||||||
Zimeigui | ||||||||||||||||
金牡丹 | 0.655 | 0.491 | 0.655 | 0.782 | ||||||||||||
Jinmudan | ||||||||||||||||
春桃香 | 0.509 | 0.436 | 0.582 | 0.509 | 0.545 | |||||||||||
Chuntaoxiang | ||||||||||||||||
新选205 | 0.618 | 0.491 | 0.800 | 0.636 | 0.727 | 0.564 | ||||||||||
Xinxuan 205 | ||||||||||||||||
新选206 | 0.600 | 0.473 | 0.782 | 0.636 | 0.764 | 0.600 | 0.709 | |||||||||
Xinxuan 206 | ||||||||||||||||
新选209 | 0.600 | 0.473 | 0.655 | 0.745 | 0.673 | 0.545 | 0.600 | 0.709 | ||||||||
Xinxuan 209 | ||||||||||||||||
新选211 | 0.691 | 0.491 | 0.618 | 0.782 | 0.655 | 0.509 | 0.582 | 0.709 | 0.782 | |||||||
Xinxuan 211 | ||||||||||||||||
新选212 | 0.636 | 0.491 | 0.691 | 0.673 | 0.655 | 0.545 | 0.673 | 0.691 | 0.709 | 0.709 | ||||||
Xinxuan 212 | ||||||||||||||||
金玫瑰 | 0.491 | 0.400 | 0.582 | 0.673 | 0.600 | 0.636 | 0.655 | 0.618 | 0.655 | 0.618 | 0.564 | |||||
Jinmeigui | ||||||||||||||||
紫牡丹 | 0.509 | 0.673 | 0.509 | 0.545 | 0.655 | 0.491 | 0.491 | 0.509 | 0.509 | 0.509 | 0.455 | 0.455 | ||||
Zimudan | ||||||||||||||||
春兰 | 0.509 | 0.491 | 0.473 | 0.382 | 0.345 | 0.436 | 0.418 | 0.509 | 0.564 | 0.455 | 0.455 | 0.382 | 0.364 | |||
Chunlan | ||||||||||||||||
凤圆春 | 0.527 | 0.400 | 0.473 | 0.400 | 0.473 | 0.418 | 0.582 | 0.527 | 0.582 | 0.527 | 0.491 | 0.473 | 0.455 | 0.436 | ||
Fengyuanchun | ||||||||||||||||
金茗早 | 0.400 | 0.418 | 0.491 | 0.455 | 0.473 | 0.527 | 0.418 | 0.527 | 0.418 | 0.418 | 0.491 | 0.455 | 0.418 | 0.436 | 0.345 | |
Jinmingzao | ||||||||||||||||
黄玫瑰 | 0.509 | 0.636 | 0.636 | 0.600 | 0.564 | 0.436 | 0.582 | 0.527 | 0.600 | 0.618 | 0.564 | 0.491 | 0.673 | 0.418 | 0.582 | 0.455 |
Huangmeigui |
Fig.5 DNA fingerprinting of ‘Tieguanyin’ and its derivative varieties based on SNP XY, XX, YY denoted the genotypes of SNP loci, XY was heterozygous, XX, YY were homozygote.
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