浙江农业学报

• 园艺科学 • 上一篇    下一篇

瓯柑NIN和Sus基因克隆、序列分析与表达

  

  1. (温州市农业科学研究院 果树研究所,浙江 温州 325006)
  • 出版日期:2016-05-25 发布日期:2016-05-19

Gene clone, sequence analysis and gene expression of NIN and Sus from Ougan fruit

  1. (Institute of Pomology, Wenzhou Academy of Agricultural Sciences, Wenzhou 325006, China)
  • Online:2016-05-25 Published:2016-05-19

摘要: 以瓯柑果肉为材料,分离瓯柑中性转化酶(NIN)和蔗糖合成酶基因(Sus),了解其序列特征,并对瓯柑NIN,Sus在不同组织的表达进行分析。结果显示:该研究首次从瓯柑果实中克隆获得NIN和Sus基因CDS全长序列,分别为1 932 bp和2 418 bp,预测分别编码643和805个氨基酸。序列比对结果显示:3个基因均高度保守,与NCBI网站上其他物种的序列同源性均高于70%,与柑橘类物种的同源性接近100%。NIN和Sus蛋白的相对分子量分别为72.18和92.19 ku,理论等电点(pI)分别为6.882和6.051。系统进化树结果显示:瓯柑NIN属于α组,推测可能定位于质体;瓯柑Sus属于Sus Ⅰ组。实时荧光定量PCR结果显示:瓯柑NIN,Sus基因在茎中表达量均最高,叶其次,果肉中表达量最低;NIN在果皮中的表达量比果肉高,Sus则处于相同水平。在果实不同发育阶段,NIN,Sus基因均在花后120 d表达最强,随后下降,接近成熟表达维持在较低的水平。结果表明:2个基因在瓯柑不同组织间的表达具有不同程度的差异性,在果实发育前期表达水平略高,随着成熟表达水平降低。

关键词: 瓯柑, 中性转化酶, 蔗糖合成酶, 基因克隆, 基因表达

Abstract: The purpose of this work was to separate NIN and Sus gene from Ougan fruit and analyze expression patterns of both two genes in different tissues at different development stages of fruits, which will provide some basic information for sugar metabolism of Ougan fruit and enrich NIN and Sus study on citrus fruit. Two full length sequences encoding NIN and Sus genes were isolated. They were 1 932 and 2 418 bp in length, respectively, encoding putative proteins of 643 and 805 amino acid. Sequence alignment results showed that both NIN and Sus were highly conserved, and shared more than 70% sequence homology with other plants from NCBI and almost 100% homology with citrus fruit. GenBank accession number for NIN and Sus from Ougan fruit was KF694988 and KF694989, respectively. Relative molecular mass of the putative NIN and Sus protein was 72.18 and 92.19 ku, respectively, and the isoelectric point (pI) was 6.882 and 6.051, respectively. Phylogenetic analysis showed that putative NIN protein belonged to Group α, which might localize in plastid, and putative Sus protein belongs to Sus Ⅰ. Results of realtime quantitative PCR showed that the mRNA level of both two genes accumulated highly in stem, then leaf, peel and flesh in descending order. The transcription level of NIN in peel was higher than that in flesh, while the transcription level of Sus in peel was relative to that in flesh. At different development stages of fruit, both genes expressed the highest at 120 after full bloom and then maintained at a low level until fruit maturation. The study showed that both NIN and Sus genes expressed with tissuespecificity, and both expressed at a higher level at the immature stage and decreased towards the ripening stage.

Key words: Ougan fruit, neutral invertase, sucrose synthase, gene clone, gene expression