浙江农业学报 ›› 2022, Vol. 34 ›› Issue (12): 2622-2628.DOI: 10.3969/j.issn.1004-1524.2022.12.05
谌婕1(), 左之才1, 才冬杰1,*(
), 付星鑫1, 刘玲利1, 张义琳1,2, 苟丽萍1, 王娅1, 任志华1, 邓俊良1
收稿日期:
2022-03-14
出版日期:
2022-12-25
发布日期:
2022-12-26
通讯作者:
才冬杰
作者简介:
*才冬杰,E-mail:18811782766@163.com基金资助:
CHEN Jie1(), ZUO Zhicai1, CAI Dongjie1,*(
), FU Xingxin1, LIU Lingli1, ZHANG Yilin1,2, GOU Liping1, WANG Ya1, REN Zhihua1, DENG Junliang1
Received:
2022-03-14
Online:
2022-12-25
Published:
2022-12-26
Contact:
CAI Dongjie
摘要:
牛病毒性腹泻病毒(Bovine viral diarrhea virus,BVDV)在全球流行率较高的基因亚型是BVDV-1b,其次是1a和2a;基因亚型1t和1n的全球流行率较低,1v亚型是近年新流行的基因亚型。BVDV新基因亚型的逐年出现说明其在不断地发生遗传变异,致其防控愈发困难。欧洲国家流行的BVDV基因亚型种类最多,说明BVDV在欧洲具有更高的遗传多样性。在亚洲发现的BVDV毒株数量则明显多于其他洲,1b是亚洲流行率最高的基因亚型。BVDV-3型在欧洲被报道次数最多,在亚洲也被报道过。本文对世界范围内BVDV的流行情况进行综述,可以丰富BVDV分子流行病学数据,也可为BVDV防控提供一定的理论基础。
中图分类号:
谌婕, 左之才, 才冬杰, 付星鑫, 刘玲利, 张义琳, 苟丽萍, 王娅, 任志华, 邓俊良. 牛病毒性腹泻病毒全球基因型与亚型流行情况[J]. 浙江农业学报, 2022, 34(12): 2622-2628.
CHEN Jie, ZUO Zhicai, CAI Dongjie, FU Xingxin, LIU Lingli, ZHANG Yilin, GOU Liping, WANG Ya, REN Zhihua, DENG Junliang. Global genotype and subgenotype prevalence of bovine viral diarrhea virus[J]. Acta Agriculturae Zhejiangensis, 2022, 34(12): 2622-2628.
国家 Country | 基因区域 Genomic region | 分离年份 Year of isolation | BVDV-1 | BVDV-2 | BVDV-3 | 文献 Reference | ||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a | b | c | d | e | f | g | h | i | j | k | l | m | n | o | p | q | r | s | t | u | v | ? | a | b | c | d | ? | |||||
阿根廷Argentina | 5'UTR, Npro, E2 | 1984—2020 | 50 | 125 | — | — | 1 | — | — | — | 1 | 4 | — | — | — | — | — | — | — | — | — | — | — | — | 2 | 6 | 13 | 1 | 1 | — | 4 | [ |
巴西Brazil | 5'UTR, Npro, E2 | 1993—2021 | 60 | 29 | — | 30 | 1 | — | — | — | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 46 | 2 | — | 3 | 9 | [ |
加拿大Canada | 5'UTR | 1990—2007 | 1 | 2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3 | — | — | — | — | — | [ |
埃及Egypt | 5'UTR, Npro | 1994—2015 | — | 7 | — | — | — | — | — | — | — | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
南非South Africa | 5'UTR | 1990—2016 | 35 | 18 | 20 | 20 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20 | — | — | — | — | — | — | [ |
美国USA | 5'UTR, Npro, E2 | 1980—2020 | 205 | 675 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3 | 121 | — | — | — | 9 | 3 | [ |
澳大利亚Australia | 5'UTR, Npro | 1985—2020 | 13 | 1 | 445 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4 | — | — | — | — | 3 | [ |
乌拉圭Uruguay | 5'UTR, Npro | 2014—2018 | 49 | — | — | — | — | — | — | — | 2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10 | — | — | — | — | [ |
奥地利Austria | 5'UTR, Npro | 1997—2014 | 4 | 134 | — | 34 | 16 | 218 | 11 | 222 | — | — | 4 | — | — | — | — | — | — | — | — | — | — | — | — | 1 | 1 | — | — | — | 3 | [ |
法国France | 5'UTR, Npro | 1993—2005 | 3 | 15 | — | 3 | 46 | — | — | — | — | — | — | 3* | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
德国Germany | 5'UTR, E2 | 1960—2014 | 1 | 31 | — | 24 | 24 | 65 | 3 | 17 | — | — | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | 11 | — | 16 | — | — | [ |
爱尔兰Ireland | 5'UTR, Npro | 1968—2014 | 428 | 19 | — | 1 | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12 | — | 1 | [ |
意大利Italy | 5'UTR | 1966—2017 | 16 | 193 | 2 | 27 | 141 | 55 | 8 | 20 | — | — | 3 | 1* | — | — | — | — | — | 2* | 1 | 1 | 2 | — | — | 8 | 10 | — | — | — | — | [ |
西班牙Spain | 5'UTR, Npro | 1989—2018 | 3 | 162 | 2 | 9 | 8 | 2 | — | 2 | — | — | 1 | 1 | — | — | — | — | — | — | — | — | — | — | — | — | 2 | 9 | — | — | 17 | [ |
土耳其Turkey | 5'UTR, Npro, E2 | 1997—2021 | 10 | 12 | 1 | 9 | — | 21 | — | 1 | 1 | — | — | 54* | — | — | — | — | — | 3* | — | — | — | — | 20 | 7 | 7 | 1 | — | — | — | [ |
英国UK | 5'UTR, Npro | 1966—2012 | 390 | 65 | — | 2 | 5 | 1 | — | — | 23 | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | 3 | 7 | — | — | — | 1 | [ |
波兰Poland | 5'UTR, Npro | 2004—2019 | — | 48 | — | 30 | 1 | 23 | 19 | — | — | — | — | — | — | — | — | — | — | 4 | 3 | — | — | — | — | — | 4 | — | — | — | — | [ |
斯洛文尼亚Slovenia | 5'UTR, Npro | 1997—2006 | 1 | 5 | — | 24 | 1 | 28 | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
芬兰Finland | 5'UTR, Npro | 1993—2004 | — | — | — | 5 | — | 1 | — | — | — | 2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
表1 BVDV在美洲、澳洲、非洲和欧洲的基因亚型分布
Table 1 Subgenotype distribution of BVDV in America, Australia, Africa and Europe
国家 Country | 基因区域 Genomic region | 分离年份 Year of isolation | BVDV-1 | BVDV-2 | BVDV-3 | 文献 Reference | ||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a | b | c | d | e | f | g | h | i | j | k | l | m | n | o | p | q | r | s | t | u | v | ? | a | b | c | d | ? | |||||
阿根廷Argentina | 5'UTR, Npro, E2 | 1984—2020 | 50 | 125 | — | — | 1 | — | — | — | 1 | 4 | — | — | — | — | — | — | — | — | — | — | — | — | 2 | 6 | 13 | 1 | 1 | — | 4 | [ |
巴西Brazil | 5'UTR, Npro, E2 | 1993—2021 | 60 | 29 | — | 30 | 1 | — | — | — | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 46 | 2 | — | 3 | 9 | [ |
加拿大Canada | 5'UTR | 1990—2007 | 1 | 2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3 | — | — | — | — | — | [ |
埃及Egypt | 5'UTR, Npro | 1994—2015 | — | 7 | — | — | — | — | — | — | — | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
南非South Africa | 5'UTR | 1990—2016 | 35 | 18 | 20 | 20 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20 | — | — | — | — | — | — | [ |
美国USA | 5'UTR, Npro, E2 | 1980—2020 | 205 | 675 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3 | 121 | — | — | — | 9 | 3 | [ |
澳大利亚Australia | 5'UTR, Npro | 1985—2020 | 13 | 1 | 445 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4 | — | — | — | — | 3 | [ |
乌拉圭Uruguay | 5'UTR, Npro | 2014—2018 | 49 | — | — | — | — | — | — | — | 2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10 | — | — | — | — | [ |
奥地利Austria | 5'UTR, Npro | 1997—2014 | 4 | 134 | — | 34 | 16 | 218 | 11 | 222 | — | — | 4 | — | — | — | — | — | — | — | — | — | — | — | — | 1 | 1 | — | — | — | 3 | [ |
法国France | 5'UTR, Npro | 1993—2005 | 3 | 15 | — | 3 | 46 | — | — | — | — | — | — | 3* | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
德国Germany | 5'UTR, E2 | 1960—2014 | 1 | 31 | — | 24 | 24 | 65 | 3 | 17 | — | — | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | 11 | — | 16 | — | — | [ |
爱尔兰Ireland | 5'UTR, Npro | 1968—2014 | 428 | 19 | — | 1 | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12 | — | 1 | [ |
意大利Italy | 5'UTR | 1966—2017 | 16 | 193 | 2 | 27 | 141 | 55 | 8 | 20 | — | — | 3 | 1* | — | — | — | — | — | 2* | 1 | 1 | 2 | — | — | 8 | 10 | — | — | — | — | [ |
西班牙Spain | 5'UTR, Npro | 1989—2018 | 3 | 162 | 2 | 9 | 8 | 2 | — | 2 | — | — | 1 | 1 | — | — | — | — | — | — | — | — | — | — | — | — | 2 | 9 | — | — | 17 | [ |
土耳其Turkey | 5'UTR, Npro, E2 | 1997—2021 | 10 | 12 | 1 | 9 | — | 21 | — | 1 | 1 | — | — | 54* | — | — | — | — | — | 3* | — | — | — | — | 20 | 7 | 7 | 1 | — | — | — | [ |
英国UK | 5'UTR, Npro | 1966—2012 | 390 | 65 | — | 2 | 5 | 1 | — | — | 23 | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | 3 | 7 | — | — | — | 1 | [ |
波兰Poland | 5'UTR, Npro | 2004—2019 | — | 48 | — | 30 | 1 | 23 | 19 | — | — | — | — | — | — | — | — | — | — | 4 | 3 | — | — | — | — | — | 4 | — | — | — | — | [ |
斯洛文尼亚Slovenia | 5'UTR, Npro | 1997—2006 | 1 | 5 | — | 24 | 1 | 28 | 1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
芬兰Finland | 5'UTR, Npro | 1993—2004 | — | — | — | 5 | — | 1 | — | — | — | 2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
国家 Country | 基因区域 Genomic region | 分离年份 Year of isolation | BVDV-1 | BVDV-2 | BVDV-3 | 文献 Reference | ||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a | b | c | d | e | f | g | h | i | j | k | l | m | n | o | p | q | r | s | t | u | v | ? | a | b | c | d | ? | |||||
中国China | 5'UTR, Npro, E2 | 1988—2021 | 63 | 124 | 57 | 48 | — | 3 | — | — | 3 | — | — | — | 104 | — | 18 | — | 21 | — | — | — | 24 | 12 | 2 | — | 2 | 1 | — | — | 2 | [ |
印度India | 5'UTR, Npro | 2000—2018 | — | 24 | 6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8 | 6 | 1 | — | — | 19 | [ |
菲律宾Philippines | E2 | 未知Unknow | — | 3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
日本Japan | 5'UTR, Npro | 1975—2020 | 358 | 1517 | 340 | — | — | — | — | — | — | — | 4 | — | 1 | 2 | 2 | — | — | — | — | — | — | — | — | 2 | 789 | 2 | — | 5 | — | [ |
韩国Korea | 5'UTR | 1999—2018 | 21 | 62 | 3 | — | — | — | — | — | — | — | — | — | — | 1 | 1 | — | — | — | — | — | — | — | — | — | 29 | — | — | — | — | [ |
蒙古国Mongolia | 5'UTR | 2013—2014 | 4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5 | 4 | — | — | — | — | [ |
表2 BVDV在亚洲的基因亚型分布
Table 2 Subgenotype distribution of BVDV in Asia
国家 Country | 基因区域 Genomic region | 分离年份 Year of isolation | BVDV-1 | BVDV-2 | BVDV-3 | 文献 Reference | ||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a | b | c | d | e | f | g | h | i | j | k | l | m | n | o | p | q | r | s | t | u | v | ? | a | b | c | d | ? | |||||
中国China | 5'UTR, Npro, E2 | 1988—2021 | 63 | 124 | 57 | 48 | — | 3 | — | — | 3 | — | — | — | 104 | — | 18 | — | 21 | — | — | — | 24 | 12 | 2 | — | 2 | 1 | — | — | 2 | [ |
印度India | 5'UTR, Npro | 2000—2018 | — | 24 | 6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8 | 6 | 1 | — | — | 19 | [ |
菲律宾Philippines | E2 | 未知Unknow | — | 3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | [ |
日本Japan | 5'UTR, Npro | 1975—2020 | 358 | 1517 | 340 | — | — | — | — | — | — | — | 4 | — | 1 | 2 | 2 | — | — | — | — | — | — | — | — | 2 | 789 | 2 | — | 5 | — | [ |
韩国Korea | 5'UTR | 1999—2018 | 21 | 62 | 3 | — | — | — | — | — | — | — | — | — | — | 1 | 1 | — | — | — | — | — | — | — | — | — | 29 | — | — | — | — | [ |
蒙古国Mongolia | 5'UTR | 2013—2014 | 4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5 | 4 | — | — | — | — | [ |
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