浙江农业学报 ›› 2024, Vol. 36 ›› Issue (9): 1977-1989.DOI: 10.3969/j.issn.1004-1524.20231050
张元元1,2(), 冯举伶1,2, 肖婧凤1,2, 关宇1,2, 龙楚儿1,2, 姚立蓉1,2, 孟亚雄1,2, 司二静1,2, 李葆春1,3, 马小乐1,2, 王化俊1,2, 周喜荣4, 刘梅金4, 汪军成1,2,*(
)
收稿日期:
2023-09-02
出版日期:
2024-09-25
发布日期:
2024-09-30
作者简介:
汪军成, E-mail: wangjc@gsau.edu.cn通讯作者:
汪军成, E-mail: 基金资助:
ZHANG Yuanyuan1,2(), FENG Juling1,2, XIAO Jingfeng1,2, GUAN Yu1,2, LONG Chuer1,2, YAO Lirong1,2, MENG Yaxiong1,2, SI Erjing1,2, LI Baochun1,3, MA Xiaole1,2, WANG Huajun1,2, ZHOU Xirong4, LIU Meijin4, WANG Juncheng1,2,*(
)
Received:
2023-09-02
Online:
2024-09-25
Published:
2024-09-30
摘要:
为了解不同地区青稞材料的遗传多样性,挖掘与农艺性状相关的标记,该研究利用92对SSR标记分析来自甘肃和西藏不同地区的102份青稞材料的遗传多样性和群体遗传结构,并利用Tassel 2.1软件的GLM模型进行SSR标记与农艺性状的关联分析。结果表明,92对标记共扫描鉴定出739个等位基因,基因多样性指数变幅为0.106~0.913,多态性信息含量变幅为0.103~0.907;遗传相似系数变幅为0.680~0.960,聚类分析将这些青稞材料分为2个亚群,具有相同亲本或亲缘关系相近的材料聚在一起;群体遗传结构分析把青稞材料分为5个亚群;鉴定出33个标记与9个农艺性状在P<0.01水平上极显著关联,与千粒重相关的标记有10个,其中标记GBM1238较为稳定,这些标记的表型变异解释率为8.95%~35.02%。综上,该研究大部分供试青稞材料的亲缘关系相近,可以引进不同的青稞遗传资源来丰富遗传背景。
中图分类号:
张元元, 冯举伶, 肖婧凤, 关宇, 龙楚儿, 姚立蓉, 孟亚雄, 司二静, 李葆春, 马小乐, 王化俊, 周喜荣, 刘梅金, 汪军成. 青稞遗传多样性及其农艺性状与SSR标记的关联分析[J]. 浙江农业学报, 2024, 36(9): 1977-1989.
ZHANG Yuanyuan, FENG Juling, XIAO Jingfeng, GUAN Yu, LONG Chuer, YAO Lirong, MENG Yaxiong, SI Erjing, LI Baochun, MA Xiaole, WANG Huajun, ZHOU Xirong, LIU Meijin, WANG Juncheng. Genetic diversity and association analysis between agronomic traits and SSR markers in hulless barley[J]. Acta Agriculturae Zhejiangensis, 2024, 36(9): 1977-1989.
编号 No. | 名称 Name | 来源 Origin place | 编号 No. | 名称 Name | 来源 Origin place |
---|---|---|---|---|---|
1 | 长芒青稞Changmangqingke | 甘南临潭Lintan, Gannan | 52 | 青稞4号Qingke 4 | 天水张川Zhangchuan, Tianshui |
2 | 碌曲白青稞Luqubaiqingke | 甘南碌曲Luqu, Gannan | 53 | 青稞5号Qingke 5 | 临夏永靖Yongjing, Linxia |
3 | 碌曲紫青稞Luquziqingke | 甘南碌曲Luqu, Gannan | 54 | 青稞6号Qingke 6 | 酒泉安西Anxi, Jiuquan |
4 | 土房紫青稞Tufangziqingke | 甘南夏河Xiahe, Gannan | 55 | 青稞7号Qingke 7 | 天水武山Wushan, Tianshui |
5 | 舟曲春青稞Zhouquchunqingke | 甘南舟曲Zhouqu, Gannan | 56 | 青稞8号Qingke 8 | 天水清水Qingshui, Tianshui |
6 | 宕昌蓝青稞Dangchanglanqingke | 陇南宕昌Dangchang, Longnan | 57 | 青溜子Qingliuzi | 甘南临潭Lintan, Gannan |
7 | 宕昌黄青稞Dangchanghuangqingke | 陇南宕昌Dangchang, Longnan | 58 | 和尚青稞Heshangqingke | 临夏积石山Jishishan, Linxia |
8 | 岷县青稞Minxianqingke | 定西岷县Minxian, Dingxi | 59 | 卷芒青稞Juanmangqingke | 武威古浪Gulang, Wuwei |
9 | 漳县青稞Zhangxianqingke | 定西漳县Zhangxian, Dingxi | 60 | 春青稞Chunqingke | 陇南礼县Lixian, Longnan |
10 | 漳县长芒青稞Zhangxianchangmangqingke | 定西漳县Zhangxian, Dingxi | 61 | 绿青稞Lvqingke | 临夏和政Hezheng, Linxia |
11 | 欧娃青稞Ouwaqingke | 定西岷县Minxian, Dingxi | 62 | 麻青稞1号Maqingke 1 | 临夏和政Hezheng, Linxia |
12 | 青稞1号Qingke 1 | 甘南夏河Xiahe, Gannan | 63 | 麻青稞2号Maqingke 2 | 甘南夏河Xiahe, Gannan |
13 | 紫青稞1号Ziqingke 1 | 甘南夏河Xiahe, Gannan | 64 | 紫青稞2号Ziqingke 2 | 张掖民乐Minle, Zhangye |
14 | 土葫芦青稞Tuhuluqingke | 金昌永昌Yongchang, Jinchang | 65 | 紫青稞3号Ziqingke 3 | 甘南卓尼Zhuoni, Gannan |
15 | 大青稞Daqingke | 临夏Linxia | 66 | 紫青稞4号Ziqingke 4 | 武威Wuwei |
16 | 大麻青稞Damaqingke | 定西临洮Lintao, Dingxi | 67 | 紫青稞5号Ziqingke 5 | 酒泉金塔Jinta, Jiuquan |
17 | 小青稞Xiaoqingke | 临夏Linxia | 68 | 紫青稞6号Ziqingke 6 | 甘南夏河Xiahe, Gannan |
18 | 无叶耳青稞Wuyeerqingke | 甘南Gannan | 69 | 紫青稞7号Ziqingke 7 | 甘南Gannan |
19 | 无叶耳紫青稞Wuyeerziqingke | 甘南夏河Xiahe, Gannan | 70 | 紫眼窝青稞Ziyanwoqingke | 张掖Zhangye |
20 | 无皮青稞Wupiqingke | 陇南礼县Lixian, Longnan | 71 | 锉青稞Cuoqingke | 甘南临潭Lintan, Gannan |
21 | 无芒青稞Wumangqingke | 平凉Pingliang | 72 | 青稞9号Qingke 9 | 张掖民乐Minle, Zhangye |
22 | 长青稞Changqingke | 甘南临潭Lintan, Gannan | 73 | 蓝青稞1号Lanqingke 1 | 张掖民乐Minle, Zhangye |
23 | 六棱青稞Liulengqingke | 张掖临泽Linze, Zhangye | 74 | 蓝青稞2号Lanqingke 2 | 张掖民乐Minle, Zhangye |
24 | 六棱小青稞Liulengxiaoqingke | 张掖临泽Linze, Zhangye | 75 | 蓝青稞3号Lanqingke 3 | 陇南宕昌Dangchang, Longnan |
25 | 六棱头青稞Liulengtouqingke | 酒泉金塔Jinta, Jiuquan | 76 | 蓝青稞4号Lanqingke 4 | 甘南Gannan |
26 | 六棱大青稞Liulengdaqingke | 酒泉金塔Jinta, Jiuquan | 77 | 褐青稞Heqingke | 白银景泰Jingtai, Baiyin |
27 | 六棱头紫青稞Liulengtouziqingke | 张掖民乐Minle, Zhangye | 78 | 藏青稞Zangqingke | 张掖民乐Minle, Zhangye |
28 | 六棱青稞1号Liulengqingke 1 | 武威民勤Minqin, Wuwei | 79 | 六棱长芒黑青稞Liulengchangmangheiqingke | 武威Wuwei |
29 | 六棱青稞2号Liulengqingke 2 | 甘南舟曲Zhouqu, Gannan | 80 | 藏青稞Zangqingke | 武威Wuwei |
30 | 六棱青稞3号Liulengqingke 3 | 甘南舟曲Zhouqu, Gannan | 81 | 香立哈青稞Xianglihaqingke | 西藏Xizang |
31 | 六棱黑青稞Liulengheiqingke | 武威Wuwei | 82 | 青稞10号Qingke 10 | 西藏Xizang |
32 | 白青稞1号Baiqingke 1 | 甘南夏河Xiahe, Gannan | 83 | 马甲青稞Majiaqingke | 西藏Xizang |
33 | 白青稞2号Baiqingke 2 | 张掖肃南Sunan, Zhangye | 84 | 农仁青稞Nongrenqingke | 西藏Xizang |
34 | 白青稞3号Baiqingke 3 | 武威Wuwei | 85 | 青稞11号Qingke 11 | 兰州永登Yongdeng, Lanzhou |
35 | 白青稞4号Baiqingke 4 | 白银景泰Jingtai, Baiyin | 86 | 青稞12号Qingke 12 | 武威古浪Gulang, Wuwei |
36 | 白青稞5号Baiqingke 5 | 白银景泰Jingtai, Baiyin | 87 | 喜拉3号Xila 3 | 西藏Xizang |
37 | 白青稞6号Baiqingke 6 | 武威古浪Gulang, Wuwei | 88 | 喜拉4号Xila 4 | 西藏Xizang |
38 | 白籽青稞Baiziqingke | 临夏Linxia | 89 | 喜拉5号Xila 5 | 西藏Xizang |
39 | 老青稞1号Laoqingke 1 | 定西漳县Zhangxian, Dingxi | 90 | 喜拉6号Xila 6 | 西藏Xizang |
40 | 老青稞2号Laoqingke 2 | 天水甘谷Gangu, Tianshui | 91 | 喜拉7号Xila 7 | 西藏Xizang |
41 | 老青稞3号Laoqingke 3 | 临夏永靖Yongjing, Linxia | 92 | 喜拉11号Xila 11 | 西藏Xizang |
42 | 老青稞4号Laoqingke 4 | 陇南西和Xihe, Longnan | 93 | 喜拉12号Xila 12 | 西藏Xizang |
43 | 红青稞Hongqingke | 甘南夏河Xiahe, Gannan | 94 | 喜拉13号Xila 13 | 西藏Xizang |
44 | 兴隆青稞Xinglongqingke | 兰州榆中Yuzhong, Lanzhou | 95 | 喜拉19号Xila 19 | 西藏Xizang |
45 | 杈青稞Chaqingke | 临夏Linxia | 96 | 喜拉22号Xila 22 | 西藏Xizang |
46 | 牡丹青稞Mudanqingke | 临夏Linxia | 97 | 喜拉42号Xila 42 | 西藏Xizang |
47 | 青皮青稞1号Qingpiqingke 1 | 张掖河西Hexi, Zhangye | 98 | 藏青1号Zangqing 1 | 西藏Xizang |
48 | 青皮青稞2号Qingpiqingke 2 | 张掖Zhangye | 99 | 藏青2号Zangqing 2 | 西藏Xizang |
49 | 青青稞Qingqingke | 兰州永登Yongdeng, Lanzhou | 100 | 藏青280号Zangqing 280 | 西藏Xizang |
50 | 青稞2号Qingke 2 | 兰州榆中Yuzhong, Lanzhou | 101 | 藏青690号Zangqing 690 | 西藏Xizang |
51 | 青稞3号Qingke 3 | 天水清水Qingshui, Tianshui | 102 | 高厚旱1号Gaohouhan 1 | 西藏Xizang |
表1 102份青稞材料名称及来源地
Table 1 Name and place of origin of 102 hulless barley germplasms
编号 No. | 名称 Name | 来源 Origin place | 编号 No. | 名称 Name | 来源 Origin place |
---|---|---|---|---|---|
1 | 长芒青稞Changmangqingke | 甘南临潭Lintan, Gannan | 52 | 青稞4号Qingke 4 | 天水张川Zhangchuan, Tianshui |
2 | 碌曲白青稞Luqubaiqingke | 甘南碌曲Luqu, Gannan | 53 | 青稞5号Qingke 5 | 临夏永靖Yongjing, Linxia |
3 | 碌曲紫青稞Luquziqingke | 甘南碌曲Luqu, Gannan | 54 | 青稞6号Qingke 6 | 酒泉安西Anxi, Jiuquan |
4 | 土房紫青稞Tufangziqingke | 甘南夏河Xiahe, Gannan | 55 | 青稞7号Qingke 7 | 天水武山Wushan, Tianshui |
5 | 舟曲春青稞Zhouquchunqingke | 甘南舟曲Zhouqu, Gannan | 56 | 青稞8号Qingke 8 | 天水清水Qingshui, Tianshui |
6 | 宕昌蓝青稞Dangchanglanqingke | 陇南宕昌Dangchang, Longnan | 57 | 青溜子Qingliuzi | 甘南临潭Lintan, Gannan |
7 | 宕昌黄青稞Dangchanghuangqingke | 陇南宕昌Dangchang, Longnan | 58 | 和尚青稞Heshangqingke | 临夏积石山Jishishan, Linxia |
8 | 岷县青稞Minxianqingke | 定西岷县Minxian, Dingxi | 59 | 卷芒青稞Juanmangqingke | 武威古浪Gulang, Wuwei |
9 | 漳县青稞Zhangxianqingke | 定西漳县Zhangxian, Dingxi | 60 | 春青稞Chunqingke | 陇南礼县Lixian, Longnan |
10 | 漳县长芒青稞Zhangxianchangmangqingke | 定西漳县Zhangxian, Dingxi | 61 | 绿青稞Lvqingke | 临夏和政Hezheng, Linxia |
11 | 欧娃青稞Ouwaqingke | 定西岷县Minxian, Dingxi | 62 | 麻青稞1号Maqingke 1 | 临夏和政Hezheng, Linxia |
12 | 青稞1号Qingke 1 | 甘南夏河Xiahe, Gannan | 63 | 麻青稞2号Maqingke 2 | 甘南夏河Xiahe, Gannan |
13 | 紫青稞1号Ziqingke 1 | 甘南夏河Xiahe, Gannan | 64 | 紫青稞2号Ziqingke 2 | 张掖民乐Minle, Zhangye |
14 | 土葫芦青稞Tuhuluqingke | 金昌永昌Yongchang, Jinchang | 65 | 紫青稞3号Ziqingke 3 | 甘南卓尼Zhuoni, Gannan |
15 | 大青稞Daqingke | 临夏Linxia | 66 | 紫青稞4号Ziqingke 4 | 武威Wuwei |
16 | 大麻青稞Damaqingke | 定西临洮Lintao, Dingxi | 67 | 紫青稞5号Ziqingke 5 | 酒泉金塔Jinta, Jiuquan |
17 | 小青稞Xiaoqingke | 临夏Linxia | 68 | 紫青稞6号Ziqingke 6 | 甘南夏河Xiahe, Gannan |
18 | 无叶耳青稞Wuyeerqingke | 甘南Gannan | 69 | 紫青稞7号Ziqingke 7 | 甘南Gannan |
19 | 无叶耳紫青稞Wuyeerziqingke | 甘南夏河Xiahe, Gannan | 70 | 紫眼窝青稞Ziyanwoqingke | 张掖Zhangye |
20 | 无皮青稞Wupiqingke | 陇南礼县Lixian, Longnan | 71 | 锉青稞Cuoqingke | 甘南临潭Lintan, Gannan |
21 | 无芒青稞Wumangqingke | 平凉Pingliang | 72 | 青稞9号Qingke 9 | 张掖民乐Minle, Zhangye |
22 | 长青稞Changqingke | 甘南临潭Lintan, Gannan | 73 | 蓝青稞1号Lanqingke 1 | 张掖民乐Minle, Zhangye |
23 | 六棱青稞Liulengqingke | 张掖临泽Linze, Zhangye | 74 | 蓝青稞2号Lanqingke 2 | 张掖民乐Minle, Zhangye |
24 | 六棱小青稞Liulengxiaoqingke | 张掖临泽Linze, Zhangye | 75 | 蓝青稞3号Lanqingke 3 | 陇南宕昌Dangchang, Longnan |
25 | 六棱头青稞Liulengtouqingke | 酒泉金塔Jinta, Jiuquan | 76 | 蓝青稞4号Lanqingke 4 | 甘南Gannan |
26 | 六棱大青稞Liulengdaqingke | 酒泉金塔Jinta, Jiuquan | 77 | 褐青稞Heqingke | 白银景泰Jingtai, Baiyin |
27 | 六棱头紫青稞Liulengtouziqingke | 张掖民乐Minle, Zhangye | 78 | 藏青稞Zangqingke | 张掖民乐Minle, Zhangye |
28 | 六棱青稞1号Liulengqingke 1 | 武威民勤Minqin, Wuwei | 79 | 六棱长芒黑青稞Liulengchangmangheiqingke | 武威Wuwei |
29 | 六棱青稞2号Liulengqingke 2 | 甘南舟曲Zhouqu, Gannan | 80 | 藏青稞Zangqingke | 武威Wuwei |
30 | 六棱青稞3号Liulengqingke 3 | 甘南舟曲Zhouqu, Gannan | 81 | 香立哈青稞Xianglihaqingke | 西藏Xizang |
31 | 六棱黑青稞Liulengheiqingke | 武威Wuwei | 82 | 青稞10号Qingke 10 | 西藏Xizang |
32 | 白青稞1号Baiqingke 1 | 甘南夏河Xiahe, Gannan | 83 | 马甲青稞Majiaqingke | 西藏Xizang |
33 | 白青稞2号Baiqingke 2 | 张掖肃南Sunan, Zhangye | 84 | 农仁青稞Nongrenqingke | 西藏Xizang |
34 | 白青稞3号Baiqingke 3 | 武威Wuwei | 85 | 青稞11号Qingke 11 | 兰州永登Yongdeng, Lanzhou |
35 | 白青稞4号Baiqingke 4 | 白银景泰Jingtai, Baiyin | 86 | 青稞12号Qingke 12 | 武威古浪Gulang, Wuwei |
36 | 白青稞5号Baiqingke 5 | 白银景泰Jingtai, Baiyin | 87 | 喜拉3号Xila 3 | 西藏Xizang |
37 | 白青稞6号Baiqingke 6 | 武威古浪Gulang, Wuwei | 88 | 喜拉4号Xila 4 | 西藏Xizang |
38 | 白籽青稞Baiziqingke | 临夏Linxia | 89 | 喜拉5号Xila 5 | 西藏Xizang |
39 | 老青稞1号Laoqingke 1 | 定西漳县Zhangxian, Dingxi | 90 | 喜拉6号Xila 6 | 西藏Xizang |
40 | 老青稞2号Laoqingke 2 | 天水甘谷Gangu, Tianshui | 91 | 喜拉7号Xila 7 | 西藏Xizang |
41 | 老青稞3号Laoqingke 3 | 临夏永靖Yongjing, Linxia | 92 | 喜拉11号Xila 11 | 西藏Xizang |
42 | 老青稞4号Laoqingke 4 | 陇南西和Xihe, Longnan | 93 | 喜拉12号Xila 12 | 西藏Xizang |
43 | 红青稞Hongqingke | 甘南夏河Xiahe, Gannan | 94 | 喜拉13号Xila 13 | 西藏Xizang |
44 | 兴隆青稞Xinglongqingke | 兰州榆中Yuzhong, Lanzhou | 95 | 喜拉19号Xila 19 | 西藏Xizang |
45 | 杈青稞Chaqingke | 临夏Linxia | 96 | 喜拉22号Xila 22 | 西藏Xizang |
46 | 牡丹青稞Mudanqingke | 临夏Linxia | 97 | 喜拉42号Xila 42 | 西藏Xizang |
47 | 青皮青稞1号Qingpiqingke 1 | 张掖河西Hexi, Zhangye | 98 | 藏青1号Zangqing 1 | 西藏Xizang |
48 | 青皮青稞2号Qingpiqingke 2 | 张掖Zhangye | 99 | 藏青2号Zangqing 2 | 西藏Xizang |
49 | 青青稞Qingqingke | 兰州永登Yongdeng, Lanzhou | 100 | 藏青280号Zangqing 280 | 西藏Xizang |
50 | 青稞2号Qingke 2 | 兰州榆中Yuzhong, Lanzhou | 101 | 藏青690号Zangqing 690 | 西藏Xizang |
51 | 青稞3号Qingke 3 | 天水清水Qingshui, Tianshui | 102 | 高厚旱1号Gaohouhan 1 | 西藏Xizang |
农艺性状 Agronomic trait | 最大值 Maximum value | 最小值 Minimum value | 平均值±标准误 Average value±standard error | 变异系数 Coefficient of variation |
---|---|---|---|---|
株高Plant height/cm | 120.00 | 45.40 | 98.65±9.90 | 0.10 |
穗长Spike length/cm | 8.90 | 3.60 | 6.29±1.06 | 0.17 |
单株分蘖数/个Number of tillers per plant | 2.00 | 0.10 | 0.67±0.30 | 0.44 |
单株粒数/粒Number of grains per plant | 111.00 | 37.00 | 70.60±15.30 | 0.22 |
单株粒重Grain weight per plant/g | 5.50 | 2.00 | 3.47±0.80 | 0.23 |
穗粒数/粒Number of grains per spike | 68.00 | 18.00 | 42.81±9.50 | 0.22 |
穗粒重Grain weight per spike/g | 3.60 | 1.10 | 2.13±0.50 | 0.25 |
千粒重Thousand grain weight/g | 64.40 | 33.30 | 49.60±5.60 | 0.11 |
生育期Growth period/d | 128.00 | 116.00 | 119.54±1.85 | 0.02 |
表2 102份青稞材料的农艺性状特征
Table 2 Characteristics of agronomic traits of 102 hulless barley germplasms
农艺性状 Agronomic trait | 最大值 Maximum value | 最小值 Minimum value | 平均值±标准误 Average value±standard error | 变异系数 Coefficient of variation |
---|---|---|---|---|
株高Plant height/cm | 120.00 | 45.40 | 98.65±9.90 | 0.10 |
穗长Spike length/cm | 8.90 | 3.60 | 6.29±1.06 | 0.17 |
单株分蘖数/个Number of tillers per plant | 2.00 | 0.10 | 0.67±0.30 | 0.44 |
单株粒数/粒Number of grains per plant | 111.00 | 37.00 | 70.60±15.30 | 0.22 |
单株粒重Grain weight per plant/g | 5.50 | 2.00 | 3.47±0.80 | 0.23 |
穗粒数/粒Number of grains per spike | 68.00 | 18.00 | 42.81±9.50 | 0.22 |
穗粒重Grain weight per spike/g | 3.60 | 1.10 | 2.13±0.50 | 0.25 |
千粒重Thousand grain weight/g | 64.40 | 33.30 | 49.60±5.60 | 0.11 |
生育期Growth period/d | 128.00 | 116.00 | 119.54±1.85 | 0.02 |
标记 Marker | 染色体 Chromosome | 遗传位置 Genetic location | 等位基因数 Number of alleles | 基因型数 Number of genotypes | 主等位基因频率 Main allele frequency | 基因多样性指数 Genetic diversity index | 多态信息含量 Polymorphic information content |
---|---|---|---|---|---|---|---|
GMS021 | 1H | 25.62 | 8 | 12 | 0.315 | 0.784 | 0.754 |
BMAC0399 | 1H | 28.86 | 10 | 12 | 0.241 | 0.838 | 0.818 |
BMAG0872 | 1H | 49.78 | 19 | 11 | 0.181 | 0.897 | 0.888 |
BMAG0347 | 1H | 53.27 | 12 | 13 | 0.343 | 0.747 | 0.710 |
BMAG0345 | 1H | 58.64 | 9 | 6 | 0.347 | 0.741 | 0.702 |
GBM1487 | 1H | 60.42 | 4 | 3 | 0.495 | 0.522 | 0.408 |
BMAC0032 | 1H | 73.34 | 12 | 11 | 0.431 | 0.684 | 0.633 |
SCSSR10477 | 1H | 79.09 | 8 | 5 | 0.486 | 0.536 | 0.428 |
BMAC0154 | 1H | 87.83 | 13 | 13 | 0.384 | 0.768 | 0.739 |
GBM1143 | 1H | 92.93 | 7 | 8 | 0.477 | 0.651 | 0.593 |
GMS149 | 1H | 129.52 | 8 | 8 | 0.463 | 0.601 | 0.520 |
SCSSR02748 | 1H | 133.46 | 6 | 8 | 0.329 | 0.768 | 0.732 |
GBMS002 | 2H | 37.94 | 6 | 4 | 0.398 | 0.665 | 0.603 |
GBM1446 | 2H | 58.13 | 6 | 4 | 0.449 | 0.605 | 0.525 |
GBM1251 | 3H | 58.80 | 5 | 4 | 0.370 | 0.745 | 0.706 |
SCSSR03381 | 2H | 63.61 | 7 | 5 | 0.384 | 0.704 | 0.654 |
GBM1459 | 2H | 64.35 | 6 | 5 | 0.407 | 0.686 | 0.630 |
GBMS160 | 2H | 75.31 | 7 | 5 | 0.398 | 0.687 | 0.634 |
BMAG0381 | 2H | 76.22 | 8 | 9 | 0.343 | 0.751 | 0.712 |
EBMATC0039 | 2H | 93.26 | 8 | 6 | 0.481 | 0.636 | 0.572 |
GBM1440 | 2H | 96.34 | 6 | 6 | 0.472 | 0.561 | 0.464 |
GBM1309 | 2H | 107.18 | 6 | 4 | 0.444 | 0.682 | 0.629 |
GBM1149 | 2H | 107.89 | 10 | 7 | 0.394 | 0.747 | 0.712 |
HVM54 | 2H | 122.41 | 9 | 10 | 0.412 | 0.752 | 0.722 |
GBM1498 | 2H | 125.71 | 10 | 7 | 0.319 | 0.802 | 0.777 |
BMAG0749 | 2H | 149.73 | 5 | 4 | 0.431 | 0.642 | 0.574 |
MWG2200 | 2H | 154.42 | 6 | 11 | 0.495 | 0.696 | 0.665 |
GBM1078 | 3H | 15.39 | 7 | 5 | 0.463 | 0.615 | 0.539 |
EBMAC0705 | 3H | 20.49 | 6 | 5 | 0.338 | 0.731 | 0.685 |
GBM1413 | 3H | 49.69 | 8 | 6 | 0.440 | 0.627 | 0.556 |
BMAG0006 | 3H | 50.14 | 4 | 2 | 0.454 | 0.584 | 0.496 |
BMAG0131 | 3H | 51.06 | 10 | 8 | 0.269 | 0.795 | 0.764 |
GBM1444 | 3H | 51.46 | 8 | 8 | 0.477 | 0.653 | 0.592 |
GBM1139 | 3H | 52.02 | 11 | 10 | 0.458 | 0.589 | 0.503 |
GBM1242 | 3H | 55.43 | 6 | 4 | 0.481 | 0.545 | 0.441 |
GBM1110 | 3H | 60.27 | 5 | 4 | 0.440 | 0.633 | 0.561 |
SCSSR25691 | 3H | 68.16 | 6 | 4 | 0.412 | 0.656 | 0.593 |
HVM60 | 3H | 73.19 | 9 | 6 | 0.227 | 0.846 | 0.828 |
BMAG0841 | 3H | 91.21 | 6 | 7 | 0.838 | 0.290 | 0.279 |
ABG004 | 3H | 111.42 | 6 | 8 | 0.671 | 0.497 | 0.449 |
BMAC0144K | 3H | 136.17 | 6 | 6 | 0.407 | 0.694 | 0.641 |
EBMAC0541 | 3H | 137.16 | 8 | 6 | 0.306 | 0.788 | 0.758 |
HVM62 | 3H | 139.43 | 6 | 6 | 0.579 | 0.539 | 0.454 |
EBMAC0708 | 3H | 142.33 | 9 | 12 | 0.347 | 0.751 | 0.714 |
GBM1238 | 3H | 146.66 | 8 | 5 | 0.440 | 0.616 | 0.540 |
GBM1420 | 3H | 152.53 | 3 | 4 | 0.514 | 0.508 | 0.388 |
GBMS183 | 3H | 154.36 | 6 | 6 | 0.491 | 0.640 | 0.579 |
MWG2282 | 4H | 5.96 | 5 | 8 | 0.838 | 0.289 | 0.276 |
GBM1465 | 4H | 17.06 | 5 | 6 | 0.880 | 0.222 | 0.215 |
HVM40 | 4H | 22.40 | 6 | 6 | 0.347 | 0.740 | 0.697 |
GBM1252 | 4H | 27.35 | 10 | 12 | 0.449 | 0.614 | 0.539 |
GBM1323 | 4H | 28.96 | 8 | 6 | 0.463 | 0.589 | 0.504 |
BMAG0740 | 4H | 50.86 | 16 | 23 | 0.264 | 0.847 | 0.830 |
EBMAG0781 | 4H | 57.42 | 5 | 3 | 0.250 | 0.755 | 0.709 |
BMAC0030 | 4H | 58.60 | 15 | 14 | 0.366 | 0.722 | 0.679 |
BMAG0490 | 4H | 62.19 | 5 | 5 | 0.491 | 0.581 | 0.494 |
HVM68 | 4H | 62.52 | 7 | 5 | 0.440 | 0.615 | 0.538 |
BMAC0310 | 4H | 64.37 | 11 | 11 | 0.384 | 0.713 | 0.667 |
BMAG0353 | 4H | 65.01 | 4 | 3 | 0.486 | 0.625 | 0.554 |
SCSSR14079 | 4H | 78.92 | 7 | 4 | 0.384 | 0.690 | 0.638 |
HVM67 | 4H | 120.5 | 6 | 5 | 0.468 | 0.613 | 0.537 |
SCSSR07106 | 5H | 20.44 | 6 | 4 | 0.449 | 0.593 | 0.509 |
BMAC0163 | 5H | 37.74 | 9 | 5 | 0.241 | 0.772 | 0.733 |
EBMAC0970 | 5H | 40.77 | 5 | 3 | 0.366 | 0.701 | 0.648 |
BMAG0571 | 5H | 42.87 | 7 | 9 | 0.435 | 0.662 | 0.603 |
GBM1293 | 5H | 50.85 | 6 | 4 | 0.417 | 0.652 | 0.589 |
BMAG0760 | 5H | 68.72 | 8 | 9 | 0.264 | 0.813 | 0.788 |
GBM1399 | 5H | 69.86 | 2 | 3 | 0.657 | 0.450 | 0.349 |
GBM1426 | 5H | 70.25 | 5 | 5 | 0.528 | 0.528 | 0.420 |
SCSSR16991 | 5H | 76.81 | 4 | 5 | 0.944 | 0.106 | 0.103 |
SCSSR15334 | 5H | 77.79 | 11 | 12 | 0.343 | 0.756 | 0.717 |
BMAC0144L | 5H | 84.78 | 10 | 9 | 0.389 | 0.702 | 0.652 |
BMAG0223 | 5H | 86.88 | 23 | 15 | 0.167 | 0.913 | 0.907 |
BMAG0812 | 5H | 90.32 | 13 | 14 | 0.347 | 0.743 | 0.703 |
SCSSR05939 | 5H | 90.64 | 4 | 5 | 0.708 | 0.449 | 0.400 |
GBM1141 | 5H | 108.26 | 4 | 7 | 0.644 | 0.498 | 0.424 |
HVDHN09 | 5H | 110.11 | 8 | 8 | 0.477 | 0.581 | 0.493 |
GMS061 | 5H | 122.09 | 11 | 9 | 0.394 | 0.722 | 0.681 |
EBMAC0824 | 5H | 125.75 | 5 | 7 | 0.759 | 0.403 | 0.379 |
SCSSR02306 | 5H | 6.13 | 8 | 9 | 0.444 | 0.656 | 0.596 |
GBM1176 | 5H | 18.59 | 5 | 5 | 0.500 | 0.628 | 0.565 |
BMAC0113 | 5H | 53.12 | 15 | 9 | 0.222 | 0.858 | 0.843 |
SCSSR15335 | 5H | 77.79 | 6 | 8 | 0.676 | 0.480 | 0.423 |
BMAG0113F | 5H | 84.78 | 14 | 8 | 0.157 | 0.891 | 0.881 |
BMAG0113D | 5H | 91.82 | 17 | 9 | 0.134 | 0.909 | 0.902 |
SCSSR10148 | 5H | 122.34 | 11 | 10 | 0.398 | 0.708 | 0.663 |
BMAG0113I | 5H | 160 | 10 | 8 | 0.236 | 0.817 | 0.791 |
EBMAC0806 | 6H | 75.46 | 9 | 8 | 0.574 | 0.576 | 0.513 |
GBM1275 | 6H | 124.29 | 2 | 3 | 0.523 | 0.499 | 0.374 |
EBMAC0713 | 7H | 12.35 | 15 | 21 | 0.190 | 0.867 | 0.853 |
HVM04 | 7H | 22.19 | 9 | 10 | 0.421 | 0.721 | 0.680 |
SCSSR07970 | 7H | 53.98 | 8 | 10 | 0.819 | 0.312 | 0.290 |
平均值Mean | 8.033 | 7.446 | 0.436 | 0.653 | 0.600 |
表3 92对SSR标记在102 份青稞材料中的多态性
Table 3 Polymorphic detection of 92 SSR markers in 102 hulless barley germplasms
标记 Marker | 染色体 Chromosome | 遗传位置 Genetic location | 等位基因数 Number of alleles | 基因型数 Number of genotypes | 主等位基因频率 Main allele frequency | 基因多样性指数 Genetic diversity index | 多态信息含量 Polymorphic information content |
---|---|---|---|---|---|---|---|
GMS021 | 1H | 25.62 | 8 | 12 | 0.315 | 0.784 | 0.754 |
BMAC0399 | 1H | 28.86 | 10 | 12 | 0.241 | 0.838 | 0.818 |
BMAG0872 | 1H | 49.78 | 19 | 11 | 0.181 | 0.897 | 0.888 |
BMAG0347 | 1H | 53.27 | 12 | 13 | 0.343 | 0.747 | 0.710 |
BMAG0345 | 1H | 58.64 | 9 | 6 | 0.347 | 0.741 | 0.702 |
GBM1487 | 1H | 60.42 | 4 | 3 | 0.495 | 0.522 | 0.408 |
BMAC0032 | 1H | 73.34 | 12 | 11 | 0.431 | 0.684 | 0.633 |
SCSSR10477 | 1H | 79.09 | 8 | 5 | 0.486 | 0.536 | 0.428 |
BMAC0154 | 1H | 87.83 | 13 | 13 | 0.384 | 0.768 | 0.739 |
GBM1143 | 1H | 92.93 | 7 | 8 | 0.477 | 0.651 | 0.593 |
GMS149 | 1H | 129.52 | 8 | 8 | 0.463 | 0.601 | 0.520 |
SCSSR02748 | 1H | 133.46 | 6 | 8 | 0.329 | 0.768 | 0.732 |
GBMS002 | 2H | 37.94 | 6 | 4 | 0.398 | 0.665 | 0.603 |
GBM1446 | 2H | 58.13 | 6 | 4 | 0.449 | 0.605 | 0.525 |
GBM1251 | 3H | 58.80 | 5 | 4 | 0.370 | 0.745 | 0.706 |
SCSSR03381 | 2H | 63.61 | 7 | 5 | 0.384 | 0.704 | 0.654 |
GBM1459 | 2H | 64.35 | 6 | 5 | 0.407 | 0.686 | 0.630 |
GBMS160 | 2H | 75.31 | 7 | 5 | 0.398 | 0.687 | 0.634 |
BMAG0381 | 2H | 76.22 | 8 | 9 | 0.343 | 0.751 | 0.712 |
EBMATC0039 | 2H | 93.26 | 8 | 6 | 0.481 | 0.636 | 0.572 |
GBM1440 | 2H | 96.34 | 6 | 6 | 0.472 | 0.561 | 0.464 |
GBM1309 | 2H | 107.18 | 6 | 4 | 0.444 | 0.682 | 0.629 |
GBM1149 | 2H | 107.89 | 10 | 7 | 0.394 | 0.747 | 0.712 |
HVM54 | 2H | 122.41 | 9 | 10 | 0.412 | 0.752 | 0.722 |
GBM1498 | 2H | 125.71 | 10 | 7 | 0.319 | 0.802 | 0.777 |
BMAG0749 | 2H | 149.73 | 5 | 4 | 0.431 | 0.642 | 0.574 |
MWG2200 | 2H | 154.42 | 6 | 11 | 0.495 | 0.696 | 0.665 |
GBM1078 | 3H | 15.39 | 7 | 5 | 0.463 | 0.615 | 0.539 |
EBMAC0705 | 3H | 20.49 | 6 | 5 | 0.338 | 0.731 | 0.685 |
GBM1413 | 3H | 49.69 | 8 | 6 | 0.440 | 0.627 | 0.556 |
BMAG0006 | 3H | 50.14 | 4 | 2 | 0.454 | 0.584 | 0.496 |
BMAG0131 | 3H | 51.06 | 10 | 8 | 0.269 | 0.795 | 0.764 |
GBM1444 | 3H | 51.46 | 8 | 8 | 0.477 | 0.653 | 0.592 |
GBM1139 | 3H | 52.02 | 11 | 10 | 0.458 | 0.589 | 0.503 |
GBM1242 | 3H | 55.43 | 6 | 4 | 0.481 | 0.545 | 0.441 |
GBM1110 | 3H | 60.27 | 5 | 4 | 0.440 | 0.633 | 0.561 |
SCSSR25691 | 3H | 68.16 | 6 | 4 | 0.412 | 0.656 | 0.593 |
HVM60 | 3H | 73.19 | 9 | 6 | 0.227 | 0.846 | 0.828 |
BMAG0841 | 3H | 91.21 | 6 | 7 | 0.838 | 0.290 | 0.279 |
ABG004 | 3H | 111.42 | 6 | 8 | 0.671 | 0.497 | 0.449 |
BMAC0144K | 3H | 136.17 | 6 | 6 | 0.407 | 0.694 | 0.641 |
EBMAC0541 | 3H | 137.16 | 8 | 6 | 0.306 | 0.788 | 0.758 |
HVM62 | 3H | 139.43 | 6 | 6 | 0.579 | 0.539 | 0.454 |
EBMAC0708 | 3H | 142.33 | 9 | 12 | 0.347 | 0.751 | 0.714 |
GBM1238 | 3H | 146.66 | 8 | 5 | 0.440 | 0.616 | 0.540 |
GBM1420 | 3H | 152.53 | 3 | 4 | 0.514 | 0.508 | 0.388 |
GBMS183 | 3H | 154.36 | 6 | 6 | 0.491 | 0.640 | 0.579 |
MWG2282 | 4H | 5.96 | 5 | 8 | 0.838 | 0.289 | 0.276 |
GBM1465 | 4H | 17.06 | 5 | 6 | 0.880 | 0.222 | 0.215 |
HVM40 | 4H | 22.40 | 6 | 6 | 0.347 | 0.740 | 0.697 |
GBM1252 | 4H | 27.35 | 10 | 12 | 0.449 | 0.614 | 0.539 |
GBM1323 | 4H | 28.96 | 8 | 6 | 0.463 | 0.589 | 0.504 |
BMAG0740 | 4H | 50.86 | 16 | 23 | 0.264 | 0.847 | 0.830 |
EBMAG0781 | 4H | 57.42 | 5 | 3 | 0.250 | 0.755 | 0.709 |
BMAC0030 | 4H | 58.60 | 15 | 14 | 0.366 | 0.722 | 0.679 |
BMAG0490 | 4H | 62.19 | 5 | 5 | 0.491 | 0.581 | 0.494 |
HVM68 | 4H | 62.52 | 7 | 5 | 0.440 | 0.615 | 0.538 |
BMAC0310 | 4H | 64.37 | 11 | 11 | 0.384 | 0.713 | 0.667 |
BMAG0353 | 4H | 65.01 | 4 | 3 | 0.486 | 0.625 | 0.554 |
SCSSR14079 | 4H | 78.92 | 7 | 4 | 0.384 | 0.690 | 0.638 |
HVM67 | 4H | 120.5 | 6 | 5 | 0.468 | 0.613 | 0.537 |
SCSSR07106 | 5H | 20.44 | 6 | 4 | 0.449 | 0.593 | 0.509 |
BMAC0163 | 5H | 37.74 | 9 | 5 | 0.241 | 0.772 | 0.733 |
EBMAC0970 | 5H | 40.77 | 5 | 3 | 0.366 | 0.701 | 0.648 |
BMAG0571 | 5H | 42.87 | 7 | 9 | 0.435 | 0.662 | 0.603 |
GBM1293 | 5H | 50.85 | 6 | 4 | 0.417 | 0.652 | 0.589 |
BMAG0760 | 5H | 68.72 | 8 | 9 | 0.264 | 0.813 | 0.788 |
GBM1399 | 5H | 69.86 | 2 | 3 | 0.657 | 0.450 | 0.349 |
GBM1426 | 5H | 70.25 | 5 | 5 | 0.528 | 0.528 | 0.420 |
SCSSR16991 | 5H | 76.81 | 4 | 5 | 0.944 | 0.106 | 0.103 |
SCSSR15334 | 5H | 77.79 | 11 | 12 | 0.343 | 0.756 | 0.717 |
BMAC0144L | 5H | 84.78 | 10 | 9 | 0.389 | 0.702 | 0.652 |
BMAG0223 | 5H | 86.88 | 23 | 15 | 0.167 | 0.913 | 0.907 |
BMAG0812 | 5H | 90.32 | 13 | 14 | 0.347 | 0.743 | 0.703 |
SCSSR05939 | 5H | 90.64 | 4 | 5 | 0.708 | 0.449 | 0.400 |
GBM1141 | 5H | 108.26 | 4 | 7 | 0.644 | 0.498 | 0.424 |
HVDHN09 | 5H | 110.11 | 8 | 8 | 0.477 | 0.581 | 0.493 |
GMS061 | 5H | 122.09 | 11 | 9 | 0.394 | 0.722 | 0.681 |
EBMAC0824 | 5H | 125.75 | 5 | 7 | 0.759 | 0.403 | 0.379 |
SCSSR02306 | 5H | 6.13 | 8 | 9 | 0.444 | 0.656 | 0.596 |
GBM1176 | 5H | 18.59 | 5 | 5 | 0.500 | 0.628 | 0.565 |
BMAC0113 | 5H | 53.12 | 15 | 9 | 0.222 | 0.858 | 0.843 |
SCSSR15335 | 5H | 77.79 | 6 | 8 | 0.676 | 0.480 | 0.423 |
BMAG0113F | 5H | 84.78 | 14 | 8 | 0.157 | 0.891 | 0.881 |
BMAG0113D | 5H | 91.82 | 17 | 9 | 0.134 | 0.909 | 0.902 |
SCSSR10148 | 5H | 122.34 | 11 | 10 | 0.398 | 0.708 | 0.663 |
BMAG0113I | 5H | 160 | 10 | 8 | 0.236 | 0.817 | 0.791 |
EBMAC0806 | 6H | 75.46 | 9 | 8 | 0.574 | 0.576 | 0.513 |
GBM1275 | 6H | 124.29 | 2 | 3 | 0.523 | 0.499 | 0.374 |
EBMAC0713 | 7H | 12.35 | 15 | 21 | 0.190 | 0.867 | 0.853 |
HVM04 | 7H | 22.19 | 9 | 10 | 0.421 | 0.721 | 0.680 |
SCSSR07970 | 7H | 53.98 | 8 | 10 | 0.819 | 0.312 | 0.290 |
平均值Mean | 8.033 | 7.446 | 0.436 | 0.653 | 0.600 |
图3 青稞亲本材料的群体结构分析图 A,显示ΔK随K值的变化趋势,表明该自然群体可分为5个类群;B,显示102份材料的群体遗传结构。
Fig.3 Population genetic analysis of hulless barley accessions A, The line chart of K-value changing with ΔK, indicating that the natural population used in this study can be divided into five groups; B, The population structure of the 102 hulless barley accessions.
标记 Marker | 株高 Plant height | 穗长 Spike length | 单株分蘖数 Number of tillers per plant | 单株粒数 Number of grains per plant | 单株粒重 Grain weight per plant | 穗粒数 Number of grains per spike | 穗粒重 Grain weight per spike | 千粒重 Thousand grain weight | 生育期 Growth period |
---|---|---|---|---|---|---|---|---|---|
BMAC0032 | 21.68 | ||||||||
GBM1446 | 12.89 | ||||||||
GBM1251 | 12.93 | ||||||||
GBM1440 | 14.58 | 12.82 | |||||||
GBM1078 | 12.00 | ||||||||
GBM1413 | 16.52 | ||||||||
GBM1444 | 14.66 | 15.28 | |||||||
GBM1139 | 23.34 | 18.68 | |||||||
GBM1110 | 15.59 | ||||||||
SCSSR25691 | 10.32 | ||||||||
HVM60 | 14.13 | ||||||||
EBMAC0541 | 21.23 | ||||||||
HVM62 | 15.33 | ||||||||
GBM1238 | 9.65 | ||||||||
GBM1252 | 14.33 | 13.30 | |||||||
EBMAG0781 | 8.95 | ||||||||
BMAC0030 | 22.85 | ||||||||
BMAG0490 | 22.41 | 17.12 | |||||||
BMAC0310 | 13.68 | ||||||||
SCSSR07106 | 19.53 | 14.92 | 19.37 | ||||||
BMAG0571 | 9.39 | ||||||||
BMAG0760 | 10.14 | ||||||||
GBM1399 | 25.1 | 35.02 | |||||||
GBM1426 | 17.34 | 21.11 | |||||||
SCSSR15334 | 20.85 | ||||||||
HVDHN09 | 23.91 | 21.13 | 20.78 | ||||||
GMS061 | 24.43 | 24.28 | 26.20 | ||||||
EBMAC0824 | 16.27 | ||||||||
SCSSR15335 | 24.21 | 22.33 | |||||||
SCSSR10148 | 23.07 | 17.39 | |||||||
BMAG0113I | 29.88 | ||||||||
EBMAC0713 | 30.97 | ||||||||
HVM04 | 15.95 |
表4 基于一般线性模型的关联标记及其对表型变异的解释率
Table 4 General linear model-based association markers and their rate of explaining phenotypic variation %
标记 Marker | 株高 Plant height | 穗长 Spike length | 单株分蘖数 Number of tillers per plant | 单株粒数 Number of grains per plant | 单株粒重 Grain weight per plant | 穗粒数 Number of grains per spike | 穗粒重 Grain weight per spike | 千粒重 Thousand grain weight | 生育期 Growth period |
---|---|---|---|---|---|---|---|---|---|
BMAC0032 | 21.68 | ||||||||
GBM1446 | 12.89 | ||||||||
GBM1251 | 12.93 | ||||||||
GBM1440 | 14.58 | 12.82 | |||||||
GBM1078 | 12.00 | ||||||||
GBM1413 | 16.52 | ||||||||
GBM1444 | 14.66 | 15.28 | |||||||
GBM1139 | 23.34 | 18.68 | |||||||
GBM1110 | 15.59 | ||||||||
SCSSR25691 | 10.32 | ||||||||
HVM60 | 14.13 | ||||||||
EBMAC0541 | 21.23 | ||||||||
HVM62 | 15.33 | ||||||||
GBM1238 | 9.65 | ||||||||
GBM1252 | 14.33 | 13.30 | |||||||
EBMAG0781 | 8.95 | ||||||||
BMAC0030 | 22.85 | ||||||||
BMAG0490 | 22.41 | 17.12 | |||||||
BMAC0310 | 13.68 | ||||||||
SCSSR07106 | 19.53 | 14.92 | 19.37 | ||||||
BMAG0571 | 9.39 | ||||||||
BMAG0760 | 10.14 | ||||||||
GBM1399 | 25.1 | 35.02 | |||||||
GBM1426 | 17.34 | 21.11 | |||||||
SCSSR15334 | 20.85 | ||||||||
HVDHN09 | 23.91 | 21.13 | 20.78 | ||||||
GMS061 | 24.43 | 24.28 | 26.20 | ||||||
EBMAC0824 | 16.27 | ||||||||
SCSSR15335 | 24.21 | 22.33 | |||||||
SCSSR10148 | 23.07 | 17.39 | |||||||
BMAG0113I | 29.88 | ||||||||
EBMAC0713 | 30.97 | ||||||||
HVM04 | 15.95 |
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