Acta Agriculturae Zhejiangensis ›› 2023, Vol. 35 ›› Issue (9): 2090-2096.DOI: 10.3969/j.issn.1004-1524.20221285
• Horticultural Science • Previous Articles Next Articles
LI Biyuan(), YUE Zhichen, ZHAO Yanting, LEI Juanli, HU Qizan, TAO Peng(
)
Received:
2022-09-01
Online:
2023-09-25
Published:
2023-10-09
Contact:
TAO Peng
CLC Number:
LI Biyuan, YUE Zhichen, ZHAO Yanting, LEI Juanli, HU Qizan, TAO Peng. Identification and functional analysis of the BrLCYB gene of lycopene β-cyclase from Chinese cabbage[J]. Acta Agriculturae Zhejiangensis, 2023, 35(9): 2090-2096.
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URL: http://www.zjnyxb.cn/EN/10.3969/j.issn.1004-1524.20221285
引物/检索序列名称Name | 序列Sequence (5 '→3') |
---|---|
LCYBF | TTTTGTTTAACTTTAAGAAGGAGATATACCATGGATACTCTCTT |
LCYBR | TCGGGCTTTGTTAGCAGCCGGATCTCAGTGTTAGTCTCTATCT |
BrLCYB-1S | CTTCTGGGTGATCTTCAATTATCTGAAAGTTAAGA |
BrLCYB-2S | CATGTAGGTGATCTTCAATTATCTGAAAGTTAAGA |
Table 1 The retrieval sequences used in this study
引物/检索序列名称Name | 序列Sequence (5 '→3') |
---|---|
LCYBF | TTTTGTTTAACTTTAAGAAGGAGATATACCATGGATACTCTCTT |
LCYBR | TCGGGCTTTGTTAGCAGCCGGATCTCAGTGTTAGTCTCTATCT |
BrLCYB-1S | CTTCTGGGTGATCTTCAATTATCTGAAAGTTAAGA |
BrLCYB-2S | CATGTAGGTGATCTTCAATTATCTGAAAGTTAAGA |
At | Br | Bni | Bo | Bna_A | Bna_C | Bju_A | Bju_B | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | |
• | • | • | • | • | • | • | • |
Table 2 Subgenomic localization and syntenic relationship of LCYB genes in Brassica species
At | Br | Bni | Bo | Bna_A | Bna_C | Bju_A | Bju_B | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | LF | MF1 | MF2 | |
• | • | • | • | • | • | • | • |
Fig.1 Amplification of the BrLCYB gene with the template DNA and cDNA of Chinese cabbage (A), gene structure and transcript type of BrLCYB in Chinese cabbage He2 line (B) and the proportion of BrLCYB-1 and BrLCYB-2 in the total BrLCYB transcripts (C)
Fig.3 The LCYB phylogenetic tree The number of the box representing the number of introns in the coding sequence of LCYB gene of the corresponding specie.
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