桃NAC家族基因生物信息学分析及其响应低温胁迫的表达特征

doi:10.3969/j.issn.1004-1524.2022.04.13

浙江农业学报 ›› 2022, Vol. 34 ›› Issue (4): 766-780.DOI: 10.3969/j.issn.1004-1524.2022.04.13

桃NAC家族基因生物信息学分析及其响应低温胁迫的表达特征

李小兰¹(), 张瑞¹, 郝兰兰¹, 王鸿¹^,²^,^*()

1.甘肃农业大学园艺学院,甘肃兰州 730070
2.甘肃省农业科学院林果花卉研究所,甘肃兰州 730070

收稿日期:2021-07-26 出版日期:2022-04-25 发布日期:2022-04-28
通讯作者: 王鸿
作者简介:*王鸿,E-mail: wrh991130@126.com
李小兰(1996—),女,甘肃定西人,硕士研究生,研究方向为果树遗传育种。E-mail: 2495318239@qq.com
基金资助:
国家自然科学基金(31760558);国家现代农业产业技术体系(CARS30-1-6)

Bioinformatics analysis of peach NAC gene family and its expression characteristics in response to low temperature stress

LI Xiaolan¹(), ZHANG Rui¹, HAO Lanlan¹, WANG Hong¹^,²^,^*()

1. College of Horticulture, Gansu Agricultural University, Lanzhou 730070, China
2. Institute of Fruit and Floriculture Research, Gansu Academy of Agricultural Sciences, Lanzhou 730070, China

Received:2021-07-26 Online:2022-04-25 Published:2022-04-28
Contact: WANG Hong

摘要/Abstract

摘要：

NAC(NAM-ATAF1/2-CUC2)是植物特有的具有多种生物功能的一类重要转录因子,在植物应对非生物胁迫、激素信号应答与器官形成中发挥重要作用。为了解桃NAC蛋白(PpNAC)及其在桃低温胁迫过程中的响应,采用生物信息学方法和qRT-PCR系统分析了桃NAC家族基因的成员、结构、功能和低温胁迫下的表达。结果表明,桃NAC家族共有119个成员,命名为PpNAC001~PpNAC119。PpNACs的氨基酸长度在68~862 aa,平均氨基酸长度为352 aa,分子量为7.2~96.1ku,等电点为4.3~9.5。除PpNAC119定位在染色体骨架上之外,其余基因均定位在桃的8条染色体上。基因结构和保守基序分析表明,位于同一亚族的成员基因结构相似,外显子数量和长度基本相同,并且同一亚族中的成员所含motif的种类和排列顺序基本相似,推测同一亚族的成员可能具有相同的功能,而不同亚族之间的差异可能与他们的功能特异性有关。对PpNACs蛋白启动子区2 000 bp的序列进行顺式作用元件分析,结果表明,脱落酸响应原件、光响应原件、茉莉酸甲酯响应原件、赤霉素响应原件、低温响应原件和生长素响应原件在筛选到的所有原件中占比较大。qRT-PCR结果显示,在4 ℃低温胁迫2、6 h,部分基因表达量上调不明显;低温胁迫12 h,16个NAC基因的表达量均显著上调。

关键词: NAC转录因子, 桃, 低温胁迫, 生物信息学

Abstract:

NAC (NAM-ATAF1/2-CUC2) are transcription factors with multiple biological functions,they play an important role in plant response to abiotic stress, hormone signal response and organ formation.In order to understand peach NAC protein (PpNAC) and its response during low temperature stress, the members, structure, function and expression of peach NAC family gene under low temperature stress were analyzed by bioinformatics and qRT-PCR.The results showed that there were 119 members in NAC family of peach, named as PpNAC001- PpNAC119. The amino acid length of PpNACs ranged from 68 to 862, with an average of 352 aa. Molecular weight ranged from 7.2 to 96.1 ku, and isoelectric point ranged from 4.3 to 9.5. Except for PpNAC119, the rest genes were located on eight chromosomes of peach. The analysis of gene structure and conserved motif showed that gene structure of the members in the same subgroup was similar, the number and length of exons were basically the same, and types and sequence of motifs contained in the members in the same subgroup were similar. The differences among different subgroups might be related to their functional specificity. The cis-acting elements in 2 000 bp sequence of PpNACs promoter was analyzed. The results showed that abscisic acid responsive, light responsive, MeJA-responsive, low-temperature responsive and auxin responsive elements accounted for a large proportion of all the selected elements. qRT-PCR analysis showed that the expression level of some genes was not significantly up-regulated compared with the control under 4 ℃ low temperature stress for 2 and 6 h.The expression levels of 16 NAC genes were significantly up-regulated after 12 h of low temperature stress.

Key words: NAC transcription factor, peach, low temperature stress, bioinformatics

中图分类号:

S662.1

李小兰, 张瑞, 郝兰兰, 王鸿. 桃NAC家族基因生物信息学分析及其响应低温胁迫的表达特征[J]. 浙江农业学报, 2022, 34(4): 766-780.

LI Xiaolan, ZHANG Rui, HAO Lanlan, WANG Hong. Bioinformatics analysis of peach NAC gene family and its expression characteristics in response to low temperature stress[J]. Acta Agriculturae Zhejiangensis, 2022, 34(4): 766-780.

图/表 8

参考文献 44

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基因 Gene	上游引物 Forward primer (5'-3')	下游引物 Reverse primer (5'-3')	CDS全长 Full CDS
PpNAC007	TTTACCAGGGCAAGCCACCAAAG	CCTACAGAGAACCCAATCGTCCAATC	867
PpNAC009	CACCAACTCAAACCCAAACCAAAGC	AGAAGTCGATTGTGGGCAAGGTAATG	825
PpNAC015	CTAAGGCTGGACGATTGGGTTCTG	GTTGGCTGTTGCTGTTGCTGTTG	888
PpNAC025	TTCTATCTCCGCCCGTGCTACC	TTGTGCTGCTGCTGCTCATCTC	1 959
PpNAC037	ATCGTTGCTGAAGTCGGATGATGAG	CTGATGTTCTCTGCCTGTGATCTTCC	1 386
PpNAC043	GAATGTGCCGCTGGAGGGATTAG	CCTGATGACCGTTGTTGAAGTTATTGC	1 635
PpNAC046	ACTCAACTCATCGGTTTGTGGTCTG	GCTAGTCTCTTGTTGCCTCTGCTTC	1 350
PpNAC048	GGTTGGTGAGGTTGGGCTCTTTC	GGTTCTCGTGTCGCTGTTGTAGG	1 059
PpNAC050	AACAGCATAAGCAGTCAGAAACGAATG	ATCAGGAACATCATCACACCCAACAG	1 170
PpNAC051	AAGCAGCGAAGCAGTTGGGATC	CTGGGTATGGGTTGGGTTTACTTGAG	714
PpNAC052	GCATCATCAGCATCATCAGCATCATC	GTAGTAGCAGCAGCAGCAGCAG	1 122
PpNAC064	AACCAGCCCCAACAAAGCCAAG	CACCTCCTCGTCCACCGTCTTC	1 050
PpNAC074	AAGGTTGTCTGTCAATCCACTGTCAC	AGCAAGATCATCACTGAGACGGTATTC	1 035
PpNAC077	GTGTGGACAAGCCTTCATCTGGATC	AGGTAGGACTCTGCCGTATATCTTCTC	2 589
PpNAC105	AGGATTTGCCACCTGGGTTTAGATTC	CCTCCCTCCTCCCTTCCAGTTTC	858
PpNAC117	AGGAAGAGAAGGCAATGGAGATCAAAG	GGTCCAGTCCACGCTCAATCTTG	876
actin	GATTCCGGTGCCCAGAAGT	CCAGCAGCTTCCATTCCAA	1 134

基因 Gene	上游引物 Forward primer (5'-3')	下游引物 Reverse primer (5'-3')	CDS全长 Full CDS
PpNAC007	TTTACCAGGGCAAGCCACCAAAG	CCTACAGAGAACCCAATCGTCCAATC	867
PpNAC009	CACCAACTCAAACCCAAACCAAAGC	AGAAGTCGATTGTGGGCAAGGTAATG	825
PpNAC015	CTAAGGCTGGACGATTGGGTTCTG	GTTGGCTGTTGCTGTTGCTGTTG	888
PpNAC025	TTCTATCTCCGCCCGTGCTACC	TTGTGCTGCTGCTGCTCATCTC	1 959
PpNAC037	ATCGTTGCTGAAGTCGGATGATGAG	CTGATGTTCTCTGCCTGTGATCTTCC	1 386
PpNAC043	GAATGTGCCGCTGGAGGGATTAG	CCTGATGACCGTTGTTGAAGTTATTGC	1 635
PpNAC046	ACTCAACTCATCGGTTTGTGGTCTG	GCTAGTCTCTTGTTGCCTCTGCTTC	1 350
PpNAC048	GGTTGGTGAGGTTGGGCTCTTTC	GGTTCTCGTGTCGCTGTTGTAGG	1 059
PpNAC050	AACAGCATAAGCAGTCAGAAACGAATG	ATCAGGAACATCATCACACCCAACAG	1 170
PpNAC051	AAGCAGCGAAGCAGTTGGGATC	CTGGGTATGGGTTGGGTTTACTTGAG	714
PpNAC052	GCATCATCAGCATCATCAGCATCATC	GTAGTAGCAGCAGCAGCAGCAG	1 122
PpNAC064	AACCAGCCCCAACAAAGCCAAG	CACCTCCTCGTCCACCGTCTTC	1 050
PpNAC074	AAGGTTGTCTGTCAATCCACTGTCAC	AGCAAGATCATCACTGAGACGGTATTC	1 035
PpNAC077	GTGTGGACAAGCCTTCATCTGGATC	AGGTAGGACTCTGCCGTATATCTTCTC	2 589
PpNAC105	AGGATTTGCCACCTGGGTTTAGATTC	CCTCCCTCCTCCCTTCCAGTTTC	858
PpNAC117	AGGAAGAGAAGGCAATGGAGATCAAAG	GGTCCAGTCCACGCTCAATCTTG	876
actin	GATTCCGGTGCCCAGAAGT	CCAGCAGCTTCCATTCCAA	1 134

基因名称 Gene name	登录号 ID	染色体位置 Chromosome location	氨基酸数量 Number of amino acids	分子量 Molecular weight/u	等电点 pI
PpNAC001	Prupe.1G063700.1_v2.0.a1	Pp01:4536126..4536752+	208	24 358.46	8.56
PpNAC002	Prupe.1G088700.1_v2.0.a1	Pp01:6635984..6637464-	321	36 564.21	5.95
PpNAC003	Prupe.1G106100.1_v2.0.a1	Pp01:8505856..8506968-	370	41 966.56	4.62
PpNAC004	Prupe.1G220400.1_v2.0.a1	Pp01:23497788..23499637-	258	29 426.38	9.21
PpNAC005	Prupe.1G234600.1_v2.0.a1	Pp01:24857188..24857640+	86	9 987.39	6.83
PpNAC006	Prupe.1G274300.1_v2.0.a1	Pp01:28043845..28045782+	482	53 569.82	6.78
PpNAC007	Prupe.1G277500.1_v2.0.a1	Pp01:28214649..28216118-	288	33 195.52	7.01
PpNAC008	Prupe.1G284800.1_v2.0.a1	Pp01:28610413..28612621-	225	25 753.79	4.68
PpNAC009	Prupe.1G284900.1_v2.0.a1	Pp01:28616906..28619692-	274	31 599.94	5.25
PpNAC010	Prupe.1G305300.2_v2.0.a1	Pp01:29886383..29890011+	449	50 929.50	4.94
PpNAC011	Prupe.1G383200.1_v2.0.a1	Pp01:34421802..34426682+	419	46 447.18	6.67
PpNAC012	Prupe.1G390000.1_v2.0.a1	Pp01:34813332..34814859+	231	26 255.84	9.15
PpNAC013	Prupe.1G432600.2_v2.0.a1	Pp01:37026200..37029641+	281	31 892.72	7.16
PpNAC014	Prupe.1G454900.2_v2.0.a1	Pp01:38207406..38210365+	342	38 086.85	8.95
PpNAC015	Prupe.1G493100.1_v2.0.a1	Pp01:40980078..40982143+	295	33 945.12	8.09
PpNAC016	Prupe.1G560100.1_v2.0.a1	Pp01:45724265..45726152+	210	23 995.66	4.97
PpNAC017	Prupe.1G575600.1_v2.0.a1	Pp01:46889483..46889899-	118	13 596.51	9.35
PpNAC018	Prupe.1G587100.2_v2.0.a1	Pp01:47661676..47664477-	466	52 751.02	6.37
PpNAC019	Prupe.2G049200.1_v2.0.a1	Pp02:5659348..5661571+	204	22 296.43	4.27
PpNAC020	Prupe.2G091300.1_v2.0.a1	Pp02:14426671..14432723+	632	68 940.74	5.75
PpNAC021	Prupe.2G091500.1_v2.0.a1	Pp02:14455612..14459601+	590	66 058.21	4.53
PpNAC022	Prupe.2G196600.1_v2.0.a1	Pp02:23403495..23405479-	400	45 230.06	5.77
PpNAC023	Prupe.2G196800.1_v2.0.a1	Pp02:23419271..23419609-	87	10 131.63	5.32
PpNAC024	Prupe.2G201200.1_v2.0.a1	Pp02:23790709..23797562-	707	74 800.88	4.72
PpNAC025	Prupe.2G201300.1_v2.0.a1	Pp02:23798315..23802572-	652	70 487.90	4.72
PpNAC026	Prupe.2G201500.1_v2.0.a1	Pp02:23815459..23815917-	68	7 161.15	4.44
PpNAC027	Prupe.2G201600.1_v2.0.a1	Pp02:23817016..23820462-	323	35 729.10	5.63
基因名称 Gene name	登录号 ID	染色体位置 Chromosome location	氨基酸数量 Number of amino acids	分子量 Molecular weight/u	等电点 pI
PpNAC028	Prupe.2G201800.1_v2.0.a1	Pp02:23824119..23826779-	455	51 326.82	4.67
PpNAC029	Prupe.2G201900.1_v2.0.a1	Pp02:23827555..23834195-	457	51 160.40	4.69
PpNAC030	Prupe.2G202000.1_v2.0.a1	Pp02:23841599..23845657-	454	50 978.29	4.56
PpNAC031	Prupe.2G202200.1_v2.0.a1	Pp02:23848561..23850429-	491	55 686.99	4.85
PpNAC032	Prupe.2G202400.2_v2.0.a1	Pp02:23864645..23868096-	419	47 395.82	5.02
PpNAC033	Prupe.2G202500.1_v2.0.a1	Pp02:23868318..23871265-	444	51 288.55	4.89
PpNAC034	Prupe.2G202600.1_v2.0.a1	Pp02:23883009..23884343-	128	14 531.48	5.96
PpNAC035	Prupe.2G202700.1_v2.0.a1	Pp02:23886403..23889133-	432	50 109.05	4.59
PpNAC036	Prupe.2G202800.1_v2.0.a1	Pp02:23891043..23894028-	470	54 263.93	7.63
PpNAC037	Prupe.2G202900.1_v2.0.a1	Pp02:23895351..23898373-	461	53 884.37	7.66
PpNAC038	Prupe.2G203100.1_v2.0.a1	Pp02:23902536..23903399-	194	22 756.93	7.80
PpNAC039	Prupe.2G204700.2_v2.0.a1	Pp02:23984542..23986033+	221	26 073.66	7.55
PpNAC040	Prupe.2G204900.1_v2.0.a1	Pp02:23987662..23989315+	183	21 472.20	4.98
PpNAC041	Prupe.2G278100.1_v2.0.a1	Pp02:27875877..27879693-	321	37 065.29	6.09
PpNAC042	Prupe.2G319900.1_v2.0.a1	Pp02:29831471..29833093+	222	24 270.56	4.39
PpNAC043	Prupe.2G320600.1_v2.0.a1	Pp02:29853474..29856798-	544	60 887.10	4.87
PpNAC044	Prupe.3G014400.1_v2.0.a1	Pp03:1026994..1031590-	682	77 379.97	5.51
PpNAC045	Prupe.3G065000.1_v2.0.a1	Pp03:4659001..4660141-	374	41 615.34	4.92
PpNAC046	Prupe.3G111400.1_v2.0.a1	Pp03:9281361..9282710-	449	50 330.25	4.60
PpNAC047	Prupe.3G178000.2_v2.0.a1	Pp03:19470346..19473006-	223	25 461.20	9.52
PpNAC048	Prupe.3G264600.1_v2.0.a1	Pp03:24890994..24892912-	352	40 162.98	6.60
PpNAC049	Prupe.3G268400.1_v2.0.a1	Pp03:25058115..25060169+	398	44 493.70	6.95
PpNAC050	Prupe.3G293200.2_v2.0.a1	Pp03:26210598..26214422+	389	42 477.19	5.11
PpNAC051	Prupe.3G310600.1_v2.0.a1	Pp03:26977887..26979629+	237	27 315.82	9.36
PpNAC052	Prupe.4G040900.1_v2.0.a1	Pp04:1927075..1929036-	373	41 068.51	8.45
PpNAC053	Prupe.4G053300.1_v2.0.a1	Pp04:2574049..2576136+	318	35 868.34	8.47
PpNAC054	Prupe.4G106100.1_v2.0.a1	Pp04:5496176..5498944-	309	35 520.20	8.88
PpNAC055	Prupe.4G112200.1_v2.0.a1	Pp04:5939862..5942299-	589	68 906.06	8.24
PpNAC056	Prupe.4G123700.2_v2.0.a1	Pp04:6748812..6751639+	361	41 057.74	6.94
PpNAC057	Prupe.4G126800.1_v2.0.a1	Pp04:6964173..6967801+	353	40 265.62	4.76
PpNAC058	Prupe.4G138500.1_v2.0.a1	Pp04:7730640..7733031+	322	37 055.31	6.67
PpNAC059	Prupe.4G143600.1_v2.0.a1	Pp04:8234798..8239256+	324	36 486.27	8.08
PpNAC060	Prupe.4G151900.1_v2.0.a1	Pp04:8685959..8686814+	254	29 516.89	5.08
PpNAC061	Prupe.4G153700.1_v2.0.a1	Pp04:8803185..8804066-	293	33 679.65	4.71
PpNAC062	Prupe.4G154000.1_v2.0.a1	Pp04:8820781..8821665-	294	33 821.61	4.60
PpNAC063	Prupe.4G175800.1_v2.0.a1	Pp04:10406603..10409389+	358	39 669.39	7.16
PpNAC064	Prupe.4G186800.1_v2.0.a1	Pp04:11116814..11118655+	349	39 226.16	8.34
PpNAC065	Prupe.4G187100.1_v2.0.a1	Pp04:11138518..11140641+	363	40 353.33	7.78
PpNAC066	Prupe.4G230600.1_v2.0.a1	Pp04:14769628..14771233+	363	41 370.74	4.69
PpNAC067	Prupe.4G230900.1_v2.0.a1	Pp04:14794681..14796205+	379	42 660.02	4.68
PpNAC068	Prupe.4G231000.1_v2.0.a1	Pp04:14804110..14805629+	381	42 670.04	4.63
PpNAC069	Prupe.4G246100.1_v2.0.a1	Pp04:16347760..16349143-	405	45 283.03	4.72
PpNAC070	Prupe.4G253600.1_v2.0.a1	Pp04:17380187..17382157-	385	44 506.96	6.37
PpNAC071	Prupe.4G255500.1_v2.0.a1	Pp04:17789226..17790714+	122	13 993.79	8.85
PpNAC072	Prupe.4G279600.1_v2.0.a1	Pp04:23605886..23608135+	292	33 718.09	6.11
PpNAC073	Prupe.5G006200.1_v2.0.a1	Pp05:707797..710859+	437	49 281.37	6.25
PpNAC074	Prupe.5G040400.1_v2.0.a1	Pp05:4430568..4433387-	344	39 145.21	5.28
PpNAC075	Prupe.5G076100.2_v2.0.a1	Pp05:9011205..9015718-	362	42 319.14	6.54
PpNAC076	Prupe.5G131900.1_v2.0.a1	Pp05:12690115..12692055-	436	50 162.09	6.17
PpNAC077	Prupe.5G135400.1_v2.0.a1	Pp05:12859748..12864064-	862	96 115.03	5.19
PpNAC078	Prupe.5G146100.1_v2.0.a1	Pp05:13431803..13433032-	264	29 871.59	8.21
基因名称 Gene name	登录号 ID	染色体位置 Chromosome location	氨基酸数量 Number of amino acids	分子量 Molecular weight/u	等电点 pI
PpNAC079	Prupe.5G196000.1_v2.0.a1	Pp05:15882585..15884747+	360	40 482.70	7.65
PpNAC080	Prupe.5G203200.1_v2.0.a1	Pp05:16322326..16323545+	182	20 966.42	6.19
PpNAC081	Prupe.5G221600.1_v2.0.a1	Pp05:17242546..17244798+	354	39 694.41	7.00
PpNAC082	Prupe.5G241300.1_v2.0.a1	Pp05:18167430..18170519-	261	29 885.22	5.07
PpNAC083	Prupe.5G244600.1_v2.0.a1	Pp05:18323103..18326470-	167	18 054.39	6.17
PpNAC084	Prupe.6G057300.1_v2.0.a1	Pp06:4012836..4014128+	327	37 364.00	5.18
PpNAC085	Prupe.6G092100.1_v2.0.a1	Pp06:6347818..6348948+	376	43 599.37	4.72
PpNAC086	Prupe.6G098300.1_v2.0.a1	Pp06:6843896..6844935-	246	28 556.34	8.85
PpNAC087	Prupe.6G098400.1_v2.0.a1	Pp06:6852172..6852417-	81	9 538.84	5.70
PpNAC088	Prupe.6G098600.1_v2.0.a1	Pp06:6857507..6859210-	348	39 831.73	8.18
PpNAC089	Prupe.6G103600.1_v2.0.a1	Pp06:7246334..7247707+	457	51 916.25	4.49
PpNAC090	Prupe.6G112000.1_v2.0.a1	Pp06:8054391..8055047+	219	25 305.55	9.34
PpNAC091	Prupe.6G133600.1_v2.0.a1	Pp06:10488017..10489878-	372	42 101.02	4.84
PpNAC092	Prupe.6G134000.1_v2.0.a1	Pp06:10531506..10533341-	372	42 101.02	4.84
PpNAC093	Prupe.6G134400.1_v2.0.a1	Pp06:10621079..10622787+	253	28 999.51	5.67
PpNAC094	Prupe.6G138100.1_v2.0.a1	Pp06:11223633..11228642+	390	43 747.80	5.88
PpNAC095	Prupe.6G238600.1_v2.0.a1	Pp06:23830614..23832830+	356	40 456.38	8.25
PpNAC096	Prupe.7G001200.1_v2.0.a1	Pp07:160287..162425+	383	42 910.39	8.23
PpNAC097	Prupe.7G001400.1_v2.0.a1	Pp07:206425..208570+	459	51 029.38	5.70
PpNAC098	Prupe.7G013900.1_v2.0.a1	Pp07:1953064..1958262-	431	48 224.95	5.19
PpNAC099	Prupe.7G014100.2_v2.0.a1	Pp07:2010746..2015688+	503	56 128.13	4.77
PpNAC100	Prupe.7G020000.1_v2.0.a1	Pp07:2997305..3001866+	201	22 047.21	4.29
PpNAC101	Prupe.7G061900.1_v2.0.a1	Pp07:10096751..10098559+	425	47 682.16	5.06
PpNAC102	Prupe.7G064900.1_v2.0.a1	Pp07:10332541..10335805-	326	37 287.93	5.72
PpNAC103	Prupe.7G065000.1_v2.0.a1	Pp07:10338166..10339835-	428	49 202.80	5.91
PpNAC104	Prupe.7G092400.2_v2.0.a1	Pp07:12503352..12507065+	356	39 886.74	5.08
PpNAC105	Prupe.7G102000.1_v2.0.a1	Pp07:13186995..13188904-	285	32 123.71	6.76
PpNAC106	Prupe.7G166300.1_v2.0.a1	Pp07:17014002..17018578+	335	38 649.15	5.00
PpNAC107	Prupe.7G217000.2_v2.0.a1	Pp07:19589218..19594669+	492	55 447.38	6.65
PpNAC108	Prupe.8G002500.1_v2.0.a1	Pp08:228506..230784+	378	42 895.62	7.29
PpNAC109	Prupe.8G035300.1_v2.0.a1	Pp08:3249694..3253129+	351	39 171.89	5.24
PpNAC110	Prupe.8G035400.1_v2.0.a1	Pp08:3254083..3258277+	351	39 402.11	5.08
PpNAC111	Prupe.8G035500.1_v2.0.a1	Pp08:3261961..3265416+	432	48 336.96	4.54
PpNAC112	Prupe.8G045800.1_v2.0.a1	Pp08:4838306..4842516+	577	65 599.97	4.91
PpNAC113	Prupe.8G058100.1_v2.0.a1	Pp08:7293635..7297369+	306	35 584.73	6.17
PpNAC114	Prupe.8G074800.1_v2.0.a1	Pp08:10907812..10909438-	271	30 979.25	8.93
PpNAC115	Prupe.8G095200.1_v2.0.a1	Pp08:12759198..12760058-	286	33 137.99	5.56
PpNAC116	Prupe.8G097100.1_v2.0.a1	Pp08:12910103..12910996+	297	34 395.46	5.73
PpNAC117	Prupe.8G174800.1_v2.0.a1	Pp08:17765903..17768100+	291	33 889.69	6.62
PpNAC118	Prupe.8G221900.1_v2.0.a1	Pp08:20115448..20119485+	284	32 867.25	5.64
PpNAC119	Prupe.I005300.1_v2.0.a1	scaffold_53:3766..5243-	381	42512.91	4.61

基因名称 Gene name	登录号 ID	染色体位置 Chromosome location	氨基酸数量 Number of amino acids	分子量 Molecular weight/u	等电点 pI
PpNAC001	Prupe.1G063700.1_v2.0.a1	Pp01:4536126..4536752+	208	24 358.46	8.56
PpNAC002	Prupe.1G088700.1_v2.0.a1	Pp01:6635984..6637464-	321	36 564.21	5.95
PpNAC003	Prupe.1G106100.1_v2.0.a1	Pp01:8505856..8506968-	370	41 966.56	4.62
PpNAC004	Prupe.1G220400.1_v2.0.a1	Pp01:23497788..23499637-	258	29 426.38	9.21
PpNAC005	Prupe.1G234600.1_v2.0.a1	Pp01:24857188..24857640+	86	9 987.39	6.83
PpNAC006	Prupe.1G274300.1_v2.0.a1	Pp01:28043845..28045782+	482	53 569.82	6.78
PpNAC007	Prupe.1G277500.1_v2.0.a1	Pp01:28214649..28216118-	288	33 195.52	7.01
PpNAC008	Prupe.1G284800.1_v2.0.a1	Pp01:28610413..28612621-	225	25 753.79	4.68
PpNAC009	Prupe.1G284900.1_v2.0.a1	Pp01:28616906..28619692-	274	31 599.94	5.25
PpNAC010	Prupe.1G305300.2_v2.0.a1	Pp01:29886383..29890011+	449	50 929.50	4.94
PpNAC011	Prupe.1G383200.1_v2.0.a1	Pp01:34421802..34426682+	419	46 447.18	6.67
PpNAC012	Prupe.1G390000.1_v2.0.a1	Pp01:34813332..34814859+	231	26 255.84	9.15
PpNAC013	Prupe.1G432600.2_v2.0.a1	Pp01:37026200..37029641+	281	31 892.72	7.16
PpNAC014	Prupe.1G454900.2_v2.0.a1	Pp01:38207406..38210365+	342	38 086.85	8.95
PpNAC015	Prupe.1G493100.1_v2.0.a1	Pp01:40980078..40982143+	295	33 945.12	8.09
PpNAC016	Prupe.1G560100.1_v2.0.a1	Pp01:45724265..45726152+	210	23 995.66	4.97
PpNAC017	Prupe.1G575600.1_v2.0.a1	Pp01:46889483..46889899-	118	13 596.51	9.35
PpNAC018	Prupe.1G587100.2_v2.0.a1	Pp01:47661676..47664477-	466	52 751.02	6.37
PpNAC019	Prupe.2G049200.1_v2.0.a1	Pp02:5659348..5661571+	204	22 296.43	4.27
PpNAC020	Prupe.2G091300.1_v2.0.a1	Pp02:14426671..14432723+	632	68 940.74	5.75
PpNAC021	Prupe.2G091500.1_v2.0.a1	Pp02:14455612..14459601+	590	66 058.21	4.53
PpNAC022	Prupe.2G196600.1_v2.0.a1	Pp02:23403495..23405479-	400	45 230.06	5.77
PpNAC023	Prupe.2G196800.1_v2.0.a1	Pp02:23419271..23419609-	87	10 131.63	5.32
PpNAC024	Prupe.2G201200.1_v2.0.a1	Pp02:23790709..23797562-	707	74 800.88	4.72
PpNAC025	Prupe.2G201300.1_v2.0.a1	Pp02:23798315..23802572-	652	70 487.90	4.72
PpNAC026	Prupe.2G201500.1_v2.0.a1	Pp02:23815459..23815917-	68	7 161.15	4.44
PpNAC027	Prupe.2G201600.1_v2.0.a1	Pp02:23817016..23820462-	323	35 729.10	5.63
基因名称 Gene name	登录号 ID	染色体位置 Chromosome location	氨基酸数量 Number of amino acids	分子量 Molecular weight/u	等电点 pI
PpNAC028	Prupe.2G201800.1_v2.0.a1	Pp02:23824119..23826779-	455	51 326.82	4.67
PpNAC029	Prupe.2G201900.1_v2.0.a1	Pp02:23827555..23834195-	457	51 160.40	4.69
PpNAC030	Prupe.2G202000.1_v2.0.a1	Pp02:23841599..23845657-	454	50 978.29	4.56
PpNAC031	Prupe.2G202200.1_v2.0.a1	Pp02:23848561..23850429-	491	55 686.99	4.85
PpNAC032	Prupe.2G202400.2_v2.0.a1	Pp02:23864645..23868096-	419	47 395.82	5.02
PpNAC033	Prupe.2G202500.1_v2.0.a1	Pp02:23868318..23871265-	444	51 288.55	4.89
PpNAC034	Prupe.2G202600.1_v2.0.a1	Pp02:23883009..23884343-	128	14 531.48	5.96
PpNAC035	Prupe.2G202700.1_v2.0.a1	Pp02:23886403..23889133-	432	50 109.05	4.59
PpNAC036	Prupe.2G202800.1_v2.0.a1	Pp02:23891043..23894028-	470	54 263.93	7.63
PpNAC037	Prupe.2G202900.1_v2.0.a1	Pp02:23895351..23898373-	461	53 884.37	7.66
PpNAC038	Prupe.2G203100.1_v2.0.a1	Pp02:23902536..23903399-	194	22 756.93	7.80
PpNAC039	Prupe.2G204700.2_v2.0.a1	Pp02:23984542..23986033+	221	26 073.66	7.55
PpNAC040	Prupe.2G204900.1_v2.0.a1	Pp02:23987662..23989315+	183	21 472.20	4.98
PpNAC041	Prupe.2G278100.1_v2.0.a1	Pp02:27875877..27879693-	321	37 065.29	6.09
PpNAC042	Prupe.2G319900.1_v2.0.a1	Pp02:29831471..29833093+	222	24 270.56	4.39
PpNAC043	Prupe.2G320600.1_v2.0.a1	Pp02:29853474..29856798-	544	60 887.10	4.87
PpNAC044	Prupe.3G014400.1_v2.0.a1	Pp03:1026994..1031590-	682	77 379.97	5.51
PpNAC045	Prupe.3G065000.1_v2.0.a1	Pp03:4659001..4660141-	374	41 615.34	4.92
PpNAC046	Prupe.3G111400.1_v2.0.a1	Pp03:9281361..9282710-	449	50 330.25	4.60
PpNAC047	Prupe.3G178000.2_v2.0.a1	Pp03:19470346..19473006-	223	25 461.20	9.52
PpNAC048	Prupe.3G264600.1_v2.0.a1	Pp03:24890994..24892912-	352	40 162.98	6.60
PpNAC049	Prupe.3G268400.1_v2.0.a1	Pp03:25058115..25060169+	398	44 493.70	6.95
PpNAC050	Prupe.3G293200.2_v2.0.a1	Pp03:26210598..26214422+	389	42 477.19	5.11
PpNAC051	Prupe.3G310600.1_v2.0.a1	Pp03:26977887..26979629+	237	27 315.82	9.36
PpNAC052	Prupe.4G040900.1_v2.0.a1	Pp04:1927075..1929036-	373	41 068.51	8.45
PpNAC053	Prupe.4G053300.1_v2.0.a1	Pp04:2574049..2576136+	318	35 868.34	8.47
PpNAC054	Prupe.4G106100.1_v2.0.a1	Pp04:5496176..5498944-	309	35 520.20	8.88
PpNAC055	Prupe.4G112200.1_v2.0.a1	Pp04:5939862..5942299-	589	68 906.06	8.24
PpNAC056	Prupe.4G123700.2_v2.0.a1	Pp04:6748812..6751639+	361	41 057.74	6.94
PpNAC057	Prupe.4G126800.1_v2.0.a1	Pp04:6964173..6967801+	353	40 265.62	4.76
PpNAC058	Prupe.4G138500.1_v2.0.a1	Pp04:7730640..7733031+	322	37 055.31	6.67
PpNAC059	Prupe.4G143600.1_v2.0.a1	Pp04:8234798..8239256+	324	36 486.27	8.08
PpNAC060	Prupe.4G151900.1_v2.0.a1	Pp04:8685959..8686814+	254	29 516.89	5.08
PpNAC061	Prupe.4G153700.1_v2.0.a1	Pp04:8803185..8804066-	293	33 679.65	4.71
PpNAC062	Prupe.4G154000.1_v2.0.a1	Pp04:8820781..8821665-	294	33 821.61	4.60
PpNAC063	Prupe.4G175800.1_v2.0.a1	Pp04:10406603..10409389+	358	39 669.39	7.16
PpNAC064	Prupe.4G186800.1_v2.0.a1	Pp04:11116814..11118655+	349	39 226.16	8.34
PpNAC065	Prupe.4G187100.1_v2.0.a1	Pp04:11138518..11140641+	363	40 353.33	7.78
PpNAC066	Prupe.4G230600.1_v2.0.a1	Pp04:14769628..14771233+	363	41 370.74	4.69
PpNAC067	Prupe.4G230900.1_v2.0.a1	Pp04:14794681..14796205+	379	42 660.02	4.68
PpNAC068	Prupe.4G231000.1_v2.0.a1	Pp04:14804110..14805629+	381	42 670.04	4.63
PpNAC069	Prupe.4G246100.1_v2.0.a1	Pp04:16347760..16349143-	405	45 283.03	4.72
PpNAC070	Prupe.4G253600.1_v2.0.a1	Pp04:17380187..17382157-	385	44 506.96	6.37
PpNAC071	Prupe.4G255500.1_v2.0.a1	Pp04:17789226..17790714+	122	13 993.79	8.85
PpNAC072	Prupe.4G279600.1_v2.0.a1	Pp04:23605886..23608135+	292	33 718.09	6.11
PpNAC073	Prupe.5G006200.1_v2.0.a1	Pp05:707797..710859+	437	49 281.37	6.25
PpNAC074	Prupe.5G040400.1_v2.0.a1	Pp05:4430568..4433387-	344	39 145.21	5.28
PpNAC075	Prupe.5G076100.2_v2.0.a1	Pp05:9011205..9015718-	362	42 319.14	6.54
PpNAC076	Prupe.5G131900.1_v2.0.a1	Pp05:12690115..12692055-	436	50 162.09	6.17
PpNAC077	Prupe.5G135400.1_v2.0.a1	Pp05:12859748..12864064-	862	96 115.03	5.19
PpNAC078	Prupe.5G146100.1_v2.0.a1	Pp05:13431803..13433032-	264	29 871.59	8.21
基因名称 Gene name	登录号 ID	染色体位置 Chromosome location	氨基酸数量 Number of amino acids	分子量 Molecular weight/u	等电点 pI
PpNAC079	Prupe.5G196000.1_v2.0.a1	Pp05:15882585..15884747+	360	40 482.70	7.65
PpNAC080	Prupe.5G203200.1_v2.0.a1	Pp05:16322326..16323545+	182	20 966.42	6.19
PpNAC081	Prupe.5G221600.1_v2.0.a1	Pp05:17242546..17244798+	354	39 694.41	7.00
PpNAC082	Prupe.5G241300.1_v2.0.a1	Pp05:18167430..18170519-	261	29 885.22	5.07
PpNAC083	Prupe.5G244600.1_v2.0.a1	Pp05:18323103..18326470-	167	18 054.39	6.17
PpNAC084	Prupe.6G057300.1_v2.0.a1	Pp06:4012836..4014128+	327	37 364.00	5.18
PpNAC085	Prupe.6G092100.1_v2.0.a1	Pp06:6347818..6348948+	376	43 599.37	4.72
PpNAC086	Prupe.6G098300.1_v2.0.a1	Pp06:6843896..6844935-	246	28 556.34	8.85
PpNAC087	Prupe.6G098400.1_v2.0.a1	Pp06:6852172..6852417-	81	9 538.84	5.70
PpNAC088	Prupe.6G098600.1_v2.0.a1	Pp06:6857507..6859210-	348	39 831.73	8.18
PpNAC089	Prupe.6G103600.1_v2.0.a1	Pp06:7246334..7247707+	457	51 916.25	4.49
PpNAC090	Prupe.6G112000.1_v2.0.a1	Pp06:8054391..8055047+	219	25 305.55	9.34
PpNAC091	Prupe.6G133600.1_v2.0.a1	Pp06:10488017..10489878-	372	42 101.02	4.84
PpNAC092	Prupe.6G134000.1_v2.0.a1	Pp06:10531506..10533341-	372	42 101.02	4.84
PpNAC093	Prupe.6G134400.1_v2.0.a1	Pp06:10621079..10622787+	253	28 999.51	5.67
PpNAC094	Prupe.6G138100.1_v2.0.a1	Pp06:11223633..11228642+	390	43 747.80	5.88
PpNAC095	Prupe.6G238600.1_v2.0.a1	Pp06:23830614..23832830+	356	40 456.38	8.25
PpNAC096	Prupe.7G001200.1_v2.0.a1	Pp07:160287..162425+	383	42 910.39	8.23
PpNAC097	Prupe.7G001400.1_v2.0.a1	Pp07:206425..208570+	459	51 029.38	5.70
PpNAC098	Prupe.7G013900.1_v2.0.a1	Pp07:1953064..1958262-	431	48 224.95	5.19
PpNAC099	Prupe.7G014100.2_v2.0.a1	Pp07:2010746..2015688+	503	56 128.13	4.77
PpNAC100	Prupe.7G020000.1_v2.0.a1	Pp07:2997305..3001866+	201	22 047.21	4.29
PpNAC101	Prupe.7G061900.1_v2.0.a1	Pp07:10096751..10098559+	425	47 682.16	5.06
PpNAC102	Prupe.7G064900.1_v2.0.a1	Pp07:10332541..10335805-	326	37 287.93	5.72
PpNAC103	Prupe.7G065000.1_v2.0.a1	Pp07:10338166..10339835-	428	49 202.80	5.91
PpNAC104	Prupe.7G092400.2_v2.0.a1	Pp07:12503352..12507065+	356	39 886.74	5.08
PpNAC105	Prupe.7G102000.1_v2.0.a1	Pp07:13186995..13188904-	285	32 123.71	6.76
PpNAC106	Prupe.7G166300.1_v2.0.a1	Pp07:17014002..17018578+	335	38 649.15	5.00
PpNAC107	Prupe.7G217000.2_v2.0.a1	Pp07:19589218..19594669+	492	55 447.38	6.65
PpNAC108	Prupe.8G002500.1_v2.0.a1	Pp08:228506..230784+	378	42 895.62	7.29
PpNAC109	Prupe.8G035300.1_v2.0.a1	Pp08:3249694..3253129+	351	39 171.89	5.24
PpNAC110	Prupe.8G035400.1_v2.0.a1	Pp08:3254083..3258277+	351	39 402.11	5.08
PpNAC111	Prupe.8G035500.1_v2.0.a1	Pp08:3261961..3265416+	432	48 336.96	4.54
PpNAC112	Prupe.8G045800.1_v2.0.a1	Pp08:4838306..4842516+	577	65 599.97	4.91
PpNAC113	Prupe.8G058100.1_v2.0.a1	Pp08:7293635..7297369+	306	35 584.73	6.17
PpNAC114	Prupe.8G074800.1_v2.0.a1	Pp08:10907812..10909438-	271	30 979.25	8.93
PpNAC115	Prupe.8G095200.1_v2.0.a1	Pp08:12759198..12760058-	286	33 137.99	5.56
PpNAC116	Prupe.8G097100.1_v2.0.a1	Pp08:12910103..12910996+	297	34 395.46	5.73
PpNAC117	Prupe.8G174800.1_v2.0.a1	Pp08:17765903..17768100+	291	33 889.69	6.62
PpNAC118	Prupe.8G221900.1_v2.0.a1	Pp08:20115448..20119485+	284	32 867.25	5.64
PpNAC119	Prupe.I005300.1_v2.0.a1	scaffold_53:3766..5243-	381	42512.91	4.61

桃NAC家族基因生物信息学分析及其响应低温胁迫的表达特征

Bioinformatics analysis of peach NAC gene family and its expression characteristics in response to low temperature stress

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